myRT

myRT report for GCA_000407825.1_Esch_coli_KTE19_V1

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Seq: KE136675.1 Escherichia coli KTE19 genomic scaffold acHaZ-supercont1.4, whole genome shotgun sequence (4059582 bp)
Overview 1 RT 1: 743535-747301 bp Neighborhood of RT #1 [743535, 747301] Q RVT-Retrons HTH_XRE Feature: gene Location: 743535-744569 bp Feature: domain Description: Q Location: 743538-744561 bp Feature: domain Description: Q Location: 743538-744561 bp Feature: gene Location: 744907-745707 bp Feature: gene Location: 745873-746823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 746056-746590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 746056-746590 bp Feature: gene Location: 746807-747109 bp Feature: domain Description: HTH_XRE Location: 746819-746981 bp Feature: domain Description: HTH_XRE Location: 74681 9-746981 bp Feature: gene Location: 747146-747301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, HTH_XRE (smart00530)

Seq: KE136674.1 Escherichia coli KTE19 genomic scaffold acHaZ-supercont1.3, whole genome shotgun sequence (192584 bp)
Overview 1 RT 1: 41677-48099 bp Neighborhood of RT #1 [41677, 48110] RVT-GII RVT-GII GIIM PRK09685 PRK13529 Feature: gene Location: 41677-41784 bp Feature: gene Location: 42088-42390 bp Feature: gene Location: 42414-42878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42687-42858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 687-42 858 bp Feature: gene Location: 42968-43915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42977-43397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 977-43397 bp Feature: domain Description: GIIM Note: maturase Location: 43472-43670 bp Feature: domain Description: GIIM Note: maturase Location: 43472 -43670 bp Feature: gene Location: 44669-45661 bp Feature: domain Description: PRK09685 Location: 44810-45611 bp Feature: domain Description: PRK09685 Location: 44810-45611 bp Feature: gene Location: 46458-48110 bp Feature: domain Description: PRK13529 Location: 46467-48099 bp Feature: domain Description: PRK1352 9 Location: 46467-48099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09685 (DNA-binding transcriptional activator FeaR; Provisional), PRK13529 (oxaloacetate-decarboxylating malate dehydrogenase)