myRT

myRT report for GCA_000407845.1_Esch_coli_KTE20_V1

Download annotations/find similar RTs

Seq: KE136677.1 Escherichia coli KTE20 genomic scaffold acHbG-supercont1.1, whole genome shotgun sequence (844371 bp)
Overview 1 RT 1: 490111-496142 bp Neighborhood of RT #1 [490111, 496279] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 490111-490251 bp Ori: EOU72881.1 Feature: domain Description: SfsB Location: 490120-490192 bp Feature: domain Description: SfsB Location: 4901 20-4901 92 bp Feature: gene Location: 490248-490718 bp Feature: gene Location: 491065-494274 bp Ori: EOU72883.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 491593-492082 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 491 593-492082 bp Feature: domain Description: nitrilase Location: 493588-494185 bp Feature: domain Description: nitrilase Location: 493588-4941 85 bp Feature: gene Location: 494590-495372 bp Ori: EOU72884.1 Feature: domain Description: AbiEi_3_N Location: 494602-494863 bp Feature: domain Description: AbiEi_3_N Location: 494602-494863 bp Feature: domain Description: AbiEi_3 Location: 494875-495331 bp Feature: domain Description: AbiEi_3 Location: 494875-495331 bp Feature: gene Location: 495359-496279 bp Ori: EOU72885.1 Feature: domain Description: AbiEii Location: 495401-496142 bp Feature: domain Description: AbiEii Location: 495401 -4961 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KE136688.1 Escherichia coli KTE20 genomic scaffold acHbG-supercont1.2, whole genome shotgun sequence (806794 bp)
Overview 1 RT 1: 348915-354901 bp Neighborhood of RT #1 [348915, 354906] DinI RVT-Retrons Q P Feature: gene Location: 348915-349148 bp Ori: EOU71456.1 Feature: domain Description: DinI Location: 348957-349143 bp Feature: domain Description: DinI Location: 348957-349143 bp Feature: gene Location: 349341-349676 bp Feature: gene Location: 350133-352073 bp Ori: EOU71458.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 350457-351081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 350457-351081 bp Feature: gene Location: 352115-353140 bp Ori: EOU71459.1 Feature: domain Description: Q Location: 352118-353135 bp Feature: domain Description: Q Location: 352 118-353135 bp Feature: gene Location: 353140-354906 bp Ori: EOU71460.1 Feature: domain Description: P Location: 353167-354901 bp Feature: domain Description: P Location: 353167-354901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)