myRT

myRT report for GCA_000407965.1_Esch_coli_KTE36_V1

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Seq: KE136766.1 Escherichia coli KTE36 genomic scaffold acHbB-supercont1.9, whole genome shotgun sequence (1090172 bp)
Overview 1 RT 1: 304534-308942 bp 2 RT 2: 719549-722782 bp 3 RT 3: 744142-749947 bp Neighborhood of RT #1 [304534, 308942] TraD PRK13889 RVT-Retrons HTH_XRE Neighborhood of RT #2 [719549, 722782] RVT-GII InsE Neighborhood of RT #3 [744142, 749947] PRK13486 PHA02517 RVT-GII GIIM Feature: gene Location: 304534-304845 bp Ori: EOU89654.1 Feature: domain Description: TraD Location: 304648-304822 bp Feature: domain Description: TraD Location: 304648-304822 bp Feature: gene Location: 305683-307185 bp Ori: EOU89655.1 Feature: domain Description: PRK13889 Location: 305686-306265 bp Feature: domain Description: PRK1 3889 Location: 305686-306265 bp Feature: gene Location: 307262-308362 bp Ori: EOU89656.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 307403-307955 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 307403-307955 bp Feature: gene Location: 308355-308636 bp Ori: EOU89657.1 Feature: domain Description: HTH_XRE Location: 308370-308535 bp Feature: domain Description: HTH_XRE Location: 308370-308535 bp Feature: gene Location: 308727-308942 bp Feature: gene Location: 719549-719761 bp Feature: gene Location: 720172-720513 bp Feature: gene Location: 720686-720955 bp Ori: EOU88942.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720791-720881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720791 -720881 bp Feature: gene Location: 721161-721370 bp Ori: EOU88943.1 Feature: domain Description: InsE Location: 721173-721359 bp Feature: domain Description: InsE Location: 721 1 73-721 359 bp Feature: gene Location: 722066-722782 bp Feature: gene Location: 744142-746151 bp Ori: EOU88969.1 Feature: domain Description: PRK13486 Location: 744145-746149 bp Feature: domain Description: PRK1 3486 Location: 7441 45-7461 49 bp Feature: gene Location: 746968-747408 bp Ori: EOU88970.1 Feature: domain Description: PHA02517 Location: 746971-747373 bp Feature: domain Description: PHA0251 7 Location: 746971 -747373 bp Feature: gene Location: 747537-749060 bp Ori: EOU88971.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747810-748542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74781 0-748542 bp Feature: domain Description: GIIM Note: maturase Location: 748617-748815 bp Feature: domain Description: GIIM Note: maturase Location: 74861 7-74881 5 bp Feature: gene Location: 749652-749947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530), RVT-GII, InsE (COG2963), PRK13486 (TonB-dependent receptor), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)

Seq: KE136760.1 Escherichia coli KTE36 genomic scaffold acHbB-supercont1.3, whole genome shotgun sequence (349425 bp)
Overview 1 RT 1: 311688-317674 bp Neighborhood of RT #1 [311688, 317679] DinI RVT-Retrons Q P Feature: gene Location: 311688-311921 bp Ori: EOU94768.1 Feature: domain Description: DinI Location: 311730-311916 bp Feature: domain Description: DinI Location: 311730-311916 bp Feature: gene Location: 312114-312449 bp Feature: gene Location: 313086-314846 bp Ori: EOU94770.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 313230-313854 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3132 30-313854 bp Feature: gene Location: 314888-315913 bp Ori: EOU94771.1 Feature: domain Description: Q Location: 314891-315908 bp Feature: domain Description: Q Location: 314891-315908 bp Feature: gene Location: 315913-317679 bp Ori: EOU94772.1 Feature: domain Description: P Location: 315940-317674 bp Feature: domain Description: P Location: 315940-317674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: KE136764.1 Escherichia coli KTE36 genomic scaffold acHbB-supercont1.7, whole genome shotgun sequence (716850 bp)
Overview 1 RT 1: 512744-514178 bp 2 RT 2: 525073-528370 bp Neighborhood of RT #1 [512744, 514402] Inovirus_Gp2 PHA02517 RVT-GII GIIM Neighborhood of RT #2 [525073, 528396] RVT-GII GIIM PHA02517 DUF987 Feature: gene Location: 512744-513175 bp Ori: EOU91248.1 Feature: domain Description: Inovirus_Gp2 Location: 512747-513167 bp Feature: domain Description: Inovirus_Gp2 Location: 512747-513 167 bp Feature: gene Location: 513228-513668 bp Ori: EOU91249.1 Feature: domain Description: PHA02517 Location: 513231-513633 bp Feature: domain Description: PHA02517 Location: 513 23 1-513 63 3 bp Feature: gene Location: 513797-514402 bp Ori: EOU91250.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513812-513884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513 812-513 884 bp Feature: domain Description: GIIM Note: maturase Location: 513959-514178 bp Feature: domain Description: GIIM Note: maturase Location: 513 959-514178 bp Feature: gene Location: 525073-525368 bp Feature: gene Location: 525960-527483 bp Ori: EOU90389.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526233-526965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52623 3 -526965 bp Feature: domain Description: GIIM Note: maturase Location: 527040-527238 bp Feature: domain Description: GIIM Note: maturase Location: 527040-52723 8 bp Feature: gene Location: 527612-528052 bp Ori: EOU90390.1 Feature: domain Description: PHA02517 Location: 527615-528017 bp Feature: domain Description: PHA02517 Location: 527615-528017 bp Feature: gene Location: 528175-528396 bp Ori: EOU90391.1 Feature: domain Description: DUF987 Location: 528178-528370 bp Feature: domain Description: DUF987 Location: 528178-5283 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inovirus_Gp2 (pfam11726), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DUF987 (pfam06174)

Seq: KE136762.1 Escherichia coli KTE36 genomic scaffold acHbB-supercont1.5, whole genome shotgun sequence (453559 bp)
Overview 1 RT 1: 1-3161 bp 2 RT 2: 340850-345676 bp Neighborhood of RT #1 [1, 3331] PHA02517 RVT-GII GIIM PHA02517 Peptidase_S74 Neighborhood of RT #2 [340850, 345723] RVT-GII GIIM PHA02517 PRK10537 Feature: gene Location: 1-159 bp Ori: EOU92996.1 Feature: domain Description: PHA02517 Location: 4-157 bp Feature: domain Description: PHA02517 Location: 4 -157 bp Feature: gene Location: 288-1811 bp Ori: EOU92997.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561-1293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561-1293 bp Feature: domain Description: GIIM Note: maturase Location: 1368-1566 bp Feature: domain Description: GIIM Note: maturase Location: 1368-1566 bp Feature: gene Location: 2403-2831 bp Ori: EOU92998.1 Feature: domain Description: PHA02517 Location: 2535-2766 bp Feature: domain Description: PHA02517 Location: 2535-2766 bp Feature: gene Location: 2963-3331 bp Ori: EOU92999.1 Feature: domain Description: Peptidase_S74 Location: 3014-3161 bp Feature: domain Description: Peptidase_S74 Location: 3014 -3161 bp Feature: gene Location: 340850-341145 bp Feature: gene Location: 341737-343260 bp Ori: EOU92354.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342010-342742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 2010-34 274 2 bp Feature: domain Description: GIIM Note: maturase Location: 342817-343015 bp Feature: domain Description: GIIM Note: maturase Location: 34 2817-34 3015 bp Feature: gene Location: 343389-343829 bp Ori: EOU92355.1 Feature: domain Description: PHA02517 Location: 343392-343794 bp Feature: domain Description: PHA02517 Location: 34 3392-34 3794 bp Feature: gene Location: 344470-345723 bp Ori: EOU92356.1 Feature: domain Description: PRK10537 Location: 344479-345676 bp Feature: domain Description: PRK10537 Location: 34 4 4 79-34 5676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S74 (pfam13884), PRK10537 (voltage-gated potassium channel protein)