myRT

myRT report for GCA_000407985.1_Esch_coli_KTE37_V1

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Seq: KE136770.1 Escherichia coli KTE37 genomic scaffold acHaO-supercont1.12, whole genome shotgun sequence (1303524 bp)
Overview 1 RT 1: 315840-319073 bp Neighborhood of RT #1 [315840, 319073] RVT-GII InsE Feature: gene Location: 315840-316052 bp Feature: gene Location: 316463-316804 bp Feature: gene Location: 316977-317246 bp Ori: EOU89781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317082-317172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 7082-31 71 72 bp Feature: gene Location: 317452-317661 bp Ori: EOU89782.1 Feature: domain Description: InsE Location: 317464-317650 bp Feature: domain Description: InsE Location: 31 7464-31 7650 bp Feature: gene Location: 318357-319073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)

Seq: KE136786.1 Escherichia coli KTE37 genomic scaffold acHaO-supercont1.4, whole genome shotgun sequence (430737 bp)
Overview 1 RT 1: 327106-333092 bp Neighborhood of RT #1 [327106, 333097] DinI RVT-Retrons Q P Feature: gene Location: 327106-327339 bp Ori: EOU97350.1 Feature: domain Description: DinI Location: 327148-327334 bp Feature: domain Description: DinI Location: 32 7148-32 7334 bp Feature: gene Location: 327532-327867 bp Feature: gene Location: 328504-330264 bp Ori: EOU97352.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 328648-329272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 8648-32 92 72 bp Feature: gene Location: 330306-331331 bp Ori: EOU97353.1 Feature: domain Description: Q Location: 330309-331326 bp Feature: domain Description: Q Location: 330309-33132 6 bp Feature: gene Location: 331331-333097 bp Ori: EOU97354.1 Feature: domain Description: P Location: 331358-333092 bp Feature: domain Description: P Location: 331358-333092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: KE136787.1 Escherichia coli KTE37 genomic scaffold acHaO-supercont1.5, whole genome shotgun sequence (208547 bp)
Overview 1 RT 1: 184373-188932 bp Neighborhood of RT #1 [184373, 188991] PRK13699 RVT_N RVT-GII GIIM HNHc PRK13699 DUF1281 DUF1281_C Feature: gene Location: 184373-184594 bp Feature: gene Location: 184595-185248 bp Ori: EOU96920.1 Feature: domain Description: PRK13699 Location: 184640-185246 bp Feature: domain Description: PRK13 699 Location: 184640-185246 bp Feature: gene Location: 185828-187528 bp Ori: EOU96921.1 Feature: domain Description: RVT_N Location: 185882-186125 bp Feature: domain Description: RVT_N Location: 185882-186125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186170-186806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186170-186806 bp Feature: domain Description: GIIM Note: maturase Location: 186857-187091 bp Feature: domain Description: GIIM Note: maturase Location: 186857-187091 bp Feature: domain Description: HNHc Note: nucleases Location: 187322-187472 bp Feature: domain Description: HNHc Note: nucleases Location: 1873 22-187472 bp Feature: gene Location: 187511-187681 bp Ori: EOU96922.1 Feature: domain Description: PRK13699 Location: 187514-187589 bp Feature: domain Description: PRK13 699 Location: 187514-187589 bp Feature: gene Location: 188065-188991 bp Ori: EOU96923.1 Feature: domain Description: DUF1281 Location: 188158-188686 bp Feature: domain Description: DUF1281 Location: 188158-188686 bp Feature: domain Description: DUF1281_C Location: 188692-188932 bp Feature: domain Description: DUF1281_C Location: 188692-18893 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)