myRT

myRT report for GCA_000408005.1_Esch_coli_KTE38_V1

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Seq: KE136818.1 Escherichia coli KTE38 genomic scaffold acHbA-supercont1.9, whole genome shotgun sequence (795870 bp)
Overview 1 RT 1: 369730-372963 bp Neighborhood of RT #1 [369730, 372963] RVT-GII InsE Feature: gene Location: 369730-369942 bp Feature: gene Location: 370353-370694 bp Feature: gene Location: 370867-371136 bp Ori: EOV04029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370972-371062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370972-371 062 bp Feature: gene Location: 371342-371551 bp Ori: EOV04030.1 Feature: domain Description: InsE Location: 371354-371540 bp Feature: domain Description: InsE Location: 371 354-371 540 bp Feature: gene Location: 372247-372963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)

Seq: KE136811.1 Escherichia coli KTE38 genomic scaffold acHbA-supercont1.27, whole genome shotgun sequence (103351 bp)
Overview 1 RT 1: 63563-68122 bp Neighborhood of RT #1 [63563, 68181] PRK13699 RVT_N RVT-GII GIIM HNHc PRK13699 DUF1281 DUF1281_C Feature: gene Location: 63563-63784 bp Feature: gene Location: 63785-64438 bp Ori: EOU97548.1 Feature: domain Description: PRK13699 Location: 63830-64436 bp Feature: domain Description: PRK13699 Location: 63830-64436 bp Feature: gene Location: 65018-66718 bp Ori: EOU97549.1 Feature: domain Description: RVT_N Location: 65072-65315 bp Feature: domain Description: RVT_N Location: 65072 -65315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65360-65996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65360-65996 bp Feature: domain Description: GIIM Note: maturase Location: 66047-66281 bp Feature: domain Description: GIIM Note: maturase Location: 66047-662 81 bp Feature: domain Description: HNHc Note: nucleases Location: 66512-66662 bp Feature: domain Description: HNHc Note: nucleases Location: 66512 -66662 bp Feature: gene Location: 66701-66871 bp Ori: EOU97550.1 Feature: domain Description: PRK13699 Location: 66704-66779 bp Feature: domain Description: PRK13699 Location: 66704-66779 bp Feature: gene Location: 67255-68181 bp Ori: EOU97551.1 Feature: domain Description: DUF1281 Location: 67348-67876 bp Feature: domain Description: DUF12 81 Location: 67348-67876 bp Feature: domain Description: DUF1281_C Location: 67882-68122 bp Feature: domain Description: DUF12 81_C Location: 67882 -6812 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: KE136812.1 Escherichia coli KTE38 genomic scaffold acHbA-supercont1.3, whole genome shotgun sequence (889619 bp)
Overview 1 RT 1: 781484-787470 bp Neighborhood of RT #1 [781484, 787475] DinI RVT-Retrons Q P Feature: gene Location: 781484-781717 bp Ori: EOV12987.1 Feature: domain Description: DinI Location: 781526-781712 bp Feature: domain Description: DinI Location: 781526-781712 bp Feature: gene Location: 781910-782245 bp Feature: gene Location: 782702-784642 bp Ori: EOV12989.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 783026-783650 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 783 026-783 650 bp Feature: gene Location: 784684-785709 bp Ori: EOV12990.1 Feature: domain Description: Q Location: 784687-785704 bp Feature: domain Description: Q Location: 784687-785704 bp Feature: gene Location: 785709-787475 bp Ori: EOV12991.1 Feature: domain Description: P Location: 785736-787470 bp Feature: domain Description: P Location: 78573 6-787470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)