myRT

myRT report for GCA_000408105.1_Esch_coli_KTE186_V1

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Seq: KE136876.1 Escherichia coli KTE186 genomic scaffold acHbC-supercont1.1, whole genome shotgun sequence (3796138 bp)
Overview 1 RT 1: 902092-907429 bp 2 RT 2: 2342623-2345487 bp 3 RT 3: 3048267-3053503 bp 4 RT 4: 3559557-3564896 bp Neighborhood of RT #1 [902092, 907437] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Neighborhood of RT #2 [2342623, 2345507] DDE_Tnp_IS66 RVT-GII GIIM InsE Neighborhood of RT #3 [3048267, 3053526] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM deoxyribose_mutarotase FucP Neighborhood of RT #4 [3559557, 3564940] COG5283 RVT-GII GIIM COG5283 COG5283 COG3499 Feature: gene Location: 902092-903009 bp Ori: EOX28499.1 Feature: domain Description: PFLE_PFLC Location: 902128-902983 bp Feature: domain Description: PFLE_PFLC Location: 9021 28-902983 bp Feature: gene Location: 903146-904051 bp Feature: gene Location: 904537-905076 bp Ori: EOX28501.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904867-904945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904867-904945 bp Feature: gene Location: 905143-905625 bp Ori: EOX28502.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905152-905392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9051 52-905392 bp Feature: domain Description: GIIM Note: maturase Location: 905440-905620 bp Feature: domain Description: GIIM Note: maturase Location: 905440-905620 bp Feature: gene Location: 905947-906135 bp Feature: gene Location: 906208-907437 bp Ori: EOX28504.1 Feature: domain Description: YesM Location: 906688-907429 bp Feature: domain Description: YesM Location: 906688-907429 bp Feature: gene Location: 2342623-2342898 bp Ori: EOX27331.1 Feature: domain Description: DDE_Tnp_IS66 Location: 2342674-2342857 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2342674-2342857 bp Feature: gene Location: 2342760-2343341 bp Feature: gene Location: 2343360-2344592 bp Ori: EOX27333.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343561-2344215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2343561 -234421 5 bp Feature: domain Description: GIIM Note: maturase Location: 2344293-2344515 bp Feature: domain Description: GIIM Note: maturase Location: 2344293-234451 5 bp Feature: gene Location: 2344930-2345067 bp Feature: gene Location: 2345082-2345507 bp Ori: EOX27335.1 Feature: domain Description: InsE Location: 2345097-2345487 bp Feature: domain Description: InsE Location: 2345097-2345487 bp Feature: gene Location: 3048267-3049673 bp Ori: EOX25705.1 Feature: domain Description: LZ_Tnp_IS66 Location: 3048384-3048597 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3048384-3048597 bp Feature: domain Description: zf-IS66 Location: 3048624-3048750 bp Feature: domain Description: zf-IS66 Location: 3048624-3048750 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3048795-3049632 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3048795-3049632 bp Feature: gene Location: 3049475-3050116 bp Feature: gene Location: 3050135-3051367 bp Ori: EOX25707.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3050336-3050990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3050336-3050990 bp Feature: domain Description: GIIM Note: maturase Location: 3051068-3051290 bp Feature: domain Description: GIIM Note: maturase Location: 3051 068-3051 290 bp Feature: gene Location: 3051659-3052198 bp Ori: EOX25708.1 Feature: domain Description: deoxyribose_mutarotase Location: 3051800-3052196 bp Feature: domain Description: deoxyribose_mutarotase Location: 3051 800-30521 96 bp Feature: gene Location: 3052210-3053526 bp Ori: EOX25709.1 Feature: domain Description: FucP Location: 3052243-3053503 bp Feature: domain Description: FucP Location: 3052243-3053503 bp Feature: gene Location: 3559557-3559892 bp Ori: EOX25434.1 Feature: domain Description: COG5283 Location: 3559560-3559824 bp Feature: domain Description: COG5283 Location: 3559560-3559824 bp Feature: gene Location: 3559752-3560363 bp Feature: gene Location: 3560382-3561614 bp Ori: EOX25436.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3560583-3561237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3560583-3561 237 bp Feature: domain Description: GIIM Note: maturase Location: 3561315-3561537 bp Feature: domain Description: GIIM Note: maturase Location: 3561 31 5-3561 537 bp Feature: gene Location: 3561669-3564458 bp Ori: EOX25437.1 Feature: domain Description: COG5283 Location: 3561705-3563313 bp Feature: domain Description: COG5283 Location: 3561 705-356331 3 bp Feature: domain Description: COG5283 Location: 3563409-3564450 bp Feature: domain Description: COG5283 Location: 3563409-3564450 bp Feature: gene Location: 3564455-3564940 bp Ori: EOX25438.1 Feature: domain Description: COG3499 Location: 3564458-3564896 bp Feature: domain Description: COG3499 Location: 3564458-3564896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972), DDE_Tnp_IS66 (pfam03050), InsE (COG2963), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), deoxyribose_mutarotase (cd09269), FucP (COG0738)
COG5283 (Phage-related tail protein ), COG3499 (Phage protein U )