myRT

myRT report for GCA_000408265.1_Esch_coli_KTE225_V1

Download annotations/find similar RTs

Seq: KE136978.1 Escherichia coli KTE225 genomic scaffold acHbf-supercont1.2, whole genome shotgun sequence (2026 bp)
Overview 1 RT 1: 659-1823 bp Neighborhood of RT #1 [659, 1909] RVT-GII GIIM Feature: gene Location: 659-1909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1 520 bp Feature: domain Description: GIIM Note: maturase Location: 1601-1823 bp Feature: domain Description: GIIM Note: maturase Location: 1 601 -1 823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KE136975.1 Escherichia coli KTE225 genomic scaffold acHbf-supercont1.1, whole genome shotgun sequence (2460 bp)
Overview 1 RT 1: 752-2030 bp Neighborhood of RT #1 [752, 2275] RVT-GII GIIM Feature: gene Location: 752-2275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025-1757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 5-1757 bp Feature: domain Description: GIIM Note: maturase Location: 1832-2030 bp Feature: domain Description: GIIM Note: maturase Location: 1832 -2 030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KE136980.1 Escherichia coli KTE225 genomic scaffold acHbf-supercont1.4, whole genome shotgun sequence (5136951 bp)
Overview 1 RT 1: 3790676-3795124 bp Neighborhood of RT #1 [3790676, 3795124] Q FRG RVT-Retrons HTH_XRE Feature: gene Location: 3790676-3791710 bp Feature: domain Description: Q Location: 3790679-3791702 bp Feature: domain Description: Q Location: 3 790679-3 791702 bp Feature: gene Location: 3792223-3793587 bp Feature: domain Description: FRG Location: 3792790-3793075 bp Feature: domain Description: FRG Location: 3 792790-3 793 075 bp Feature: gene Location: 3793696-3794673 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3793903-3794446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 793 903 -3 794446 bp Feature: gene Location: 3794612-3794932 bp Feature: domain Description: HTH_XRE Location: 3794627-3794786 bp Feature: domain Description: HTH_XRE Location: 3 794627-3 794786 bp Feature: gene Location: 3794969-3795124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530)

Seq: KE136981.1 Escherichia coli KTE225 genomic scaffold acHbf-supercont1.5, whole genome shotgun sequence (114134 bp)
Overview 1 RT 1: 50007-55608 bp Neighborhood of RT #1 [50007, 56345] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc AdoMet_MTases DUF3560 Feature: gene Location: 50007-50240 bp Feature: domain Description: DUF905 Location: 50037-50235 bp Feature: domain Description: DUF905 Location: 50037-50235 bp Feature: gene Location: 50298-50744 bp Feature: domain Description: PRK13732 Location: 50301-50742 bp Feature: domain Description: PRK13732 Location: 50301-5074 2 bp Feature: gene Location: 50939-52840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51206-52037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51206-52037 bp Feature: domain Description: Intron_maturas2 Location: 52151-52409 bp Feature: domain Description: Intron_maturas2 Location: 52151-524 09 bp Feature: domain Description: HNHc Note: nucleases Location: 52583-52745 bp Feature: domain Description: HNHc Note: nucleases Location: 52583-5274 5 bp Feature: gene Location: 54374-54937 bp Feature: domain Description: AdoMet_MTases Location: 54536-54836 bp Feature: domain Description: AdoMet_MTases Location: 54 536-54 836 bp Feature: gene Location: 54984-56345 bp Feature: domain Description: DUF3560 Location: 55251-55608 bp Feature: domain Description: DUF3560 Location: 55251-55608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AdoMet_MTases (cl17173), DUF3560 (pfam12083)