myRT

myRT report for GCA_000408405.1_Esch_coli_KTE69_V1

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Seq: KE137066.1 Escherichia coli KTE69 genomic scaffold acHaK-supercont1.5, whole genome shotgun sequence (932448 bp)
Overview 1 RT 1: 110796-116782 bp Neighborhood of RT #1 [110796, 116787] P Q RVT-Retrons DinI Feature: gene Location: 110796-112562 bp Ori: EOV67758.1 Feature: domain Description: P Location: 110823-112557 bp Feature: domain Description: P Location: 1 1 0823-1 1 2557 bp Feature: gene Location: 112562-113587 bp Ori: EOV67759.1 Feature: domain Description: Q Location: 112565-113582 bp Feature: domain Description: Q Location: 1 1 2565-1 1 3582 bp Feature: gene Location: 113629-115569 bp Ori: EOV67760.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113953-114577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 3953-1 1 4577 bp Feature: gene Location: 116026-116361 bp Feature: gene Location: 116554-116787 bp Ori: EOV67762.1 Feature: domain Description: DinI Location: 116596-116782 bp Feature: domain Description: DinI Location: 1 1 6596-1 1 6782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DinI (pfam06183)

Seq: KE137054.1 Escherichia coli KTE69 genomic scaffold acHaK-supercont1.1, whole genome shotgun sequence (514897 bp)
Overview 1 RT 1: 238751-241114 bp Neighborhood of RT #1 [238751, 241114] RVT-UG17 SLATT_5 Feature: gene Location: 238751-240121 bp Ori: EOV69813.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 238979-239585 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 38979-2 39585 bp Feature: gene Location: 240099-240650 bp Ori: EOV69814.1 Feature: domain Description: SLATT_5 Location: 240108-240621 bp Feature: domain Description: SLATT_5 Location: 2 40108-2 4062 1 bp Feature: gene Location: 241016-241114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: KE137068.1 Escherichia coli KTE69 genomic scaffold acHaK-supercont1.7, whole genome shotgun sequence (1624518 bp)
Overview 1 RT 1: 357319-360552 bp Neighborhood of RT #1 [357319, 360552] RVT-GII InsE Feature: gene Location: 357319-357531 bp Feature: gene Location: 357942-358283 bp Feature: gene Location: 358456-358725 bp Ori: EOV62872.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358561-358651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 58561-3 58651 bp Feature: gene Location: 358931-359140 bp Ori: EOV62873.1 Feature: domain Description: InsE Location: 358943-359129 bp Feature: domain Description: InsE Location: 3 58943 -3 59129 bp Feature: gene Location: 359836-360552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)