myRT

myRT report for GCA_000408665.1_Esch_coli_KTE121_V1

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Seq: KE137222.1 Escherichia coli KTE121 genomic scaffold acHaE-supercont1.6, whole genome shotgun sequence (3119279 bp)
Overview 1 RT 1: 1267037-1270522 bp 2 RT 2: 2551755-2557786 bp Neighborhood of RT #1 [1267037, 1270524] InsE PHA02517 RVT-GII GIIM PHA02517 PHA02517 Neighborhood of RT #2 [2551755, 2557923] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 1267037-1267363 bp Ori: EOW27638.1 Feature: domain Description: InsE Location: 1267040-1267361 bp Feature: domain Description: InsE Location: 1 267040-1 267361 bp Feature: gene Location: 1267363-1267842 bp Ori: EOW27639.1 Feature: domain Description: PHA02517 Location: 1267423-1267777 bp Feature: domain Description: PHA0251 7 Location: 1 267423-1 267777 bp Feature: gene Location: 1268434-1269957 bp Ori: EOW27640.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1268707-1269439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 268707-1 269439 bp Feature: domain Description: GIIM Note: maturase Location: 1269514-1269712 bp Feature: domain Description: GIIM Note: maturase Location: 1 26951 4-1 26971 2 bp Feature: gene Location: 1270074-1270367 bp Ori: EOW27641.1 Feature: domain Description: PHA02517 Location: 1270077-1270350 bp Feature: domain Description: PHA0251 7 Location: 1 270077-1 270350 bp Feature: gene Location: 1270330-1270524 bp Ori: EOW27642.1 Feature: domain Description: PHA02517 Location: 1270348-1270522 bp Feature: domain Description: PHA0251 7 Location: 1 270348-1 270522 bp Feature: gene Location: 2551755-2551895 bp Ori: EOW24389.1 Feature: domain Description: SfsB Location: 2551764-2551836 bp Feature: domain Description: SfsB Location: 2551 764-2551 836 bp Feature: gene Location: 2551892-2552362 bp Feature: gene Location: 2552709-2555918 bp Ori: EOW24391.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2553237-2553726 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2553237-2553726 bp Feature: domain Description: nitrilase Location: 2555232-2555829 bp Feature: domain Description: nitrilase Location: 2555232-2555829 bp Feature: gene Location: 2556234-2557016 bp Ori: EOW24392.1 Feature: domain Description: AbiEi_3_N Location: 2556246-2556507 bp Feature: domain Description: AbiEi_3_N Location: 2556246-2556507 bp Feature: domain Description: AbiEi_3 Location: 2556519-2556975 bp Feature: domain Description: AbiEi_3 Location: 255651 9-2556975 bp Feature: gene Location: 2557003-2557923 bp Ori: EOW24393.1 Feature: domain Description: AbiEii Location: 2557045-2557786 bp Feature: domain Description: AbiEii Location: 2557045-2557786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KE137217.1 Escherichia coli KTE121 genomic scaffold acHaE-supercont1.1, whole genome shotgun sequence (154228 bp)
Overview 1 RT 1: 1-3782 bp Neighborhood of RT #1 [1, 3787] RVT-GII GIIM Tra5 InsE Feature: gene Location: 1-409 bp Feature: gene Location: 1001-2524 bp Ori: EOW36533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 74-2 006 bp Feature: domain Description: GIIM Note: maturase Location: 2084-2279 bp Feature: domain Description: GIIM Note: maturase Location: 2 084-2 2 79 bp Feature: gene Location: 2844-3491 bp Ori: EOW36534.1 Feature: domain Description: Tra5 Location: 2955-3465 bp Feature: domain Description: Tra5 Location: 2 955-3465 bp Feature: gene Location: 3488-3787 bp Ori: EOW36535.1 Feature: domain Description: InsE Location: 3515-3782 bp Feature: domain Description: InsE Location: 3515-3782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), InsE (COG2963)