myRT

myRT report for GCA_000408945.1_ASM40894v1

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Seq: APIO01000047.1 Pseudomonas sp. G5(2012) strain G5 PG5_47, whole genome shotgun sequence (162875 bp)
Overview 1 RT 1: 37953-44827 bp Neighborhood of RT #1 [37953, 44827] COG4688 COG4688 RVT-UG7 Feature: gene Location: 37953-39884 bp Ori: EPA96097.1 Feature: domain Description: COG4688 Location: 38550-38739 bp Feature: domain Description: COG4688 Location: 38550-38739 bp Feature: domain Description: COG4688 Location: 39168-39849 bp Feature: domain Description: COG4688 Location: 391 68-39849 bp Feature: gene Location: 40936-41070 bp Feature: gene Location: 41660-43288 bp Ori: EPA96099.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 42080-42497 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 42080-42497 bp Feature: gene Location: 43697-44332 bp Feature: gene Location: 44663-44827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4688 (Uncharacterized protein ), RVT-UG7

Seq: APIO01000092.1 Pseudomonas sp. G5(2012) strain G5 PG5_92, whole genome shotgun sequence (60241 bp)
Overview 1 RT 1: 9665-14155 bp Neighborhood of RT #1 [9665, 14155] RVT-Retrons recD_rel Feature: gene Location: 9665-9814 bp Feature: gene Location: 10086-10295 bp Feature: gene Location: 10368-11525 bp Ori: EPA94406.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10506-11073 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10506-11073 bp Feature: gene Location: 11676-13958 bp Ori: EPA94407.1 Feature: domain Description: recD_rel Location: 11976-13884 bp Feature: domain Description: recD_rel Location: 11976-13884 bp Feature: gene Location: 14003-14155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, recD_rel (TIGR01448)

Seq: APIO01000154.1 Pseudomonas sp. G5(2012) strain G5 PG5_154, whole genome shotgun sequence (1840 bp)
Overview 1 RT 1: 104-1609 bp Neighborhood of RT #1 [104, 1752] RVT-GII GIIM Feature: gene Location: 104-229 bp Feature: gene Location: 460-1752 bp Ori: EPA92713.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-13 3 6 bp Feature: domain Description: GIIM Note: maturase Location: 1390-1609 bp Feature: domain Description: GIIM Note: maturase Location: 13 90-1609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)