myRT

myRT report for GCA_000409185.1_ASM40918v1

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Seq: ASJM01005398.1 Pseudomonas syringae strain mixed scf_4502_11919_contig_1, whole genome shotgun sequence (1838 bp)
Overview 1 RT 1: 90-1323 bp Neighborhood of RT #1 [90, 1457] RVT-GII GIIM Feature: gene Location: 90-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1 038 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1323 bp Feature: domain Description: GIIM Note: maturase Location: 1 095-1 323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ASJM01005708.1 Pseudomonas syringae strain mixed scf_4502_13543_contig_1, whole genome shotgun sequence (6770 bp)
Overview 1 RT 1: 2492-5498 bp Neighborhood of RT #1 [2492, 5498] RVT-Retrons CSP_CDS Feature: gene Location: 2492-2674 bp Feature: gene Location: 3488-3670 bp Feature: gene Location: 3716-4897 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3857-4424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3857-442 4 bp Feature: gene Location: 4900-5118 bp Feature: domain Description: CSP_CDS Location: 4927-5104 bp Feature: domain Description: CSP_CDS Location: 492 7-5104 bp Feature: gene Location: 5160-5498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CSP_CDS (cd04458)

Seq: KE138695.1 Pseudomonas syringae strain mixed genomic scaffold scf_4502_15849, whole genome shotgun sequence (5151 bp)
Overview 1 RT 1: 273-3689 bp Neighborhood of RT #1 [273, 3689] RVT-G2L4 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 273-575 bp Feature: gene Location: 653-847 bp Feature: gene Location: 882-2162 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1128-1713 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1128-1713 bp Feature: gene Location: 2833-3114 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2836-2953 bp Feature: domain Description: DDE_Tnp_IS66 Location: 283 6-2953 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2977-3088 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2977-3 088 bp Feature: gene Location: 3144-3689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: ASJM01007560.1 Pseudomonas syringae strain mixed scf_4502_34827_contig_1, whole genome shotgun sequence (1124 bp)
Overview 1 RT 1: 586-1123 bp Neighborhood of RT #1 [586, 1122] RVT-Retrons Feature: gene Location: 586-1122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 721-1123 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 721-1123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons