myRT

myRT report for GCA_000411195.1_Delf_acid_CCUG_274B_V1

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Seq: KE150347.1 Delftia acidovorans CCUG 274B genomic scaffold acHMQ-supercont1.8, whole genome shotgun sequence (276109 bp)
Overview 1 RT 1: 244957-253422 bp Neighborhood of RT #1 [244957, 253422] AraC RVT-Retrons SWIM Feature: gene Location: 244957-245340 bp Feature: gene Location: 245372-246184 bp Ori: EPD40373.1 Feature: domain Description: AraC Location: 245837-246167 bp Feature: domain Description: AraC Location: 245837-2461 67 bp Feature: gene Location: 246188-248191 bp Ori: EPD40374.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 246761-247388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 246761 -247388 bp Feature: gene Location: 248499-250229 bp Ori: EPD40375.1 Feature: domain Description: SWIM Location: 250029-250140 bp Feature: domain Description: SWIM Location: 250029-2501 40 bp Feature: gene Location: 250261-253422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), RVT-Retrons, SWIM (pfam04434)

Seq: KE150296.1 Delftia acidovorans CCUG 274B genomic scaffold acHMQ-supercont1.33, whole genome shotgun sequence (64669 bp)
Overview 1 RT 1: 771-4568 bp Neighborhood of RT #1 [771, 4568] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 771-1175 bp Ori: EPD35063.1 Feature: domain Description: DUF1566 Location: 915-1152 bp Feature: domain Description: DUF1566 Location: 915-1152 bp Feature: gene Location: 1206-1664 bp Ori: EPD35064.1 Feature: domain Description: Avd_like Location: 1233-1539 bp Feature: domain Description: Avd_like Location: 12 33-1539 bp Feature: gene Location: 1820-2920 bp Ori: EPD35065.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2012-2687 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 012 -2 687 bp Feature: gene Location: 3080-4267 bp Feature: gene Location: 4260-4568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs