myRT

myRT report for GCA_000413035.1_Trep_medi_ATCC_700293_V1

Download annotations/find similar RTs

Seq: KE332517.1 Treponema medium ATCC 700293 genomic scaffold acAqN-supercont-complete, whole genome shotgun sequence (2727508 bp)
Overview 1 RT 1: 1186412-1191953 bp 2 RT 2: 2462796-2469345 bp Neighborhood of RT #1 [1186412, 1192876] yhbS Acetyltransf_1 RVT-AbiP2 S_TKc YeeA Neighborhood of RT #2 [2462796, 2469362] FN3 DUF1566 T_den_put_tspse T_den_put_tspse RVT-DGRs DppB DppC Feature: gene Location: 1186412-1187050 bp Ori: EPF29062.1 Feature: domain Description: yhbS Location: 1186424-1186943 bp Feature: domain Description: yhbS Location: 1 1 86424-1 1 86943 bp Feature: gene Location: 1187079-1187588 bp Ori: EPF29063.1 Feature: domain Description: Acetyltransf_1 Location: 1187217-1187508 bp Feature: domain Description: Acetyltransf_1 Location: 1 1 8721 7-1 1 87508 bp Feature: gene Location: 1187959-1189485 bp Ori: EPF29064.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1188382-1188835 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 1 88382-1 1 88835 bp Feature: gene Location: 1189706-1190917 bp Ori: EPF29065.1 Feature: domain Description: S_TKc Location: 1189832-1190771 bp Feature: domain Description: S_TKc Location: 1 1 89832-1 1 90771 bp Feature: gene Location: 1190939-1192876 bp Ori: EPF29066.1 Feature: domain Description: YeeA Location: 1190975-1191953 bp Feature: domain Description: YeeA Location: 1 1 90975-1 1 91 953 bp Feature: gene Location: 2462796-2464763 bp Ori: EPF27646.1 Feature: domain Description: FN3 Location: 2462940-2463195 bp Feature: domain Description: FN3 Location: 2462940-24631 95 bp Feature: domain Description: DUF1566 Location: 2464425-2464746 bp Feature: domain Description: DUF1 566 Location: 2464425-2464746 bp Feature: gene Location: 2465287-2466084 bp Ori: EPF27647.1 Feature: domain Description: T_den_put_tspse Location: 2465326-2465551 bp Feature: domain Description: T_den_put_tspse Location: 2465326-2465551 bp Feature: domain Description: T_den_put_tspse Location: 2465752-2466079 bp Feature: domain Description: T_den_put_tspse Location: 2465752-2466079 bp Feature: gene Location: 2466492-2467454 bp Ori: EPF27648.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2466495-2467161 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2466495-24671 61 bp Feature: gene Location: 2467625-2468569 bp Ori: EPF27649.1 Feature: domain Description: DppB Location: 2467646-2468531 bp Feature: domain Description: DppB Location: 2467646-2468531 bp Feature: gene Location: 2468571-2469362 bp Ori: EPF27650.1 Feature: domain Description: DppC Location: 2468604-2469345 bp Feature: domain Description: DppC Location: 2468604-2469345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT yhbS (COG3153), Acetyltransf_1 (pfam00583), RVT-AbiP2, S_TKc (smart00220), YeeA (COG1002), FN3 (smart00060), DUF1566 (pfam07603), T_den_put_tspse (TIGR01784), RVT-DGRs, DppB (COG0601)
DppC (COG1173)