myRT

myRT report for GCA_000415305.1_ASM41530v1

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Seq: KE352138.1 Enterococcus faecium SD1C-2 genomic scaffold Scaffold9, whole genome shotgun sequence (4753 bp)
Overview 1 RT 1: 2701-4421 bp Neighborhood of RT #1 [2701, 4633] PinE DUF3892 RVT-Retrons Feature: gene Location: 2701-3315 bp Ori: EPI17982.1 Feature: domain Description: PinE Location: 2707-3298 bp Feature: domain Description: PinE Location: 2707-3298 bp Feature: gene Location: 3704-3976 bp Ori: EPI17983.1 Feature: domain Description: DUF3892 Location: 3716-3968 bp Feature: domain Description: DUF3892 Location: 371 6-3968 bp Feature: gene Location: 4121-4633 bp Ori: EPI17984.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4124-4421 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 24-4421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), DUF3892 (pfam13031), RVT-Retrons

Seq: KE352095.1 Enterococcus faecium SD1C-2 genomic scaffold Scaffold33, whole genome shotgun sequence (2928 bp)
Overview 1 RT 1: 1992-2892 bp Neighborhood of RT #1 [1992, 2897] HTH_XRE RVT-Retrons Feature: gene Location: 1992-2276 bp Feature: gene Location: 2323-2604 bp Ori: EPI17264.1 Feature: domain Description: HTH_XRE Location: 2335-2500 bp Feature: domain Description: HTH_XRE Location: 2 335-2 500 bp Feature: gene Location: 2607-2897 bp Ori: EPI17265.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2745-2892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 745-2 892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons