myRT

myRT report for GCA_000416465.2_ASM41646v2

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Seq: AOJV01000135.1 Pseudomonas syringae pv. theae ICMP 3923 scaffold240, whole genome shotgun sequence (1856 bp)
Overview 1 RT 1: 1-1234 bp Neighborhood of RT #1 [1, 1476] RVT-GII GIIM Feature: gene Location: 1-1476 bp Ori: EPM69266.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: domain Description: GIIM Note: maturase Location: 1006-1234 bp Feature: domain Description: GIIM Note: maturase Location: 1 006-1 234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AOJV01000183.1 Pseudomonas syringae pv. theae ICMP 3923 scaffold158, whole genome shotgun sequence (10054 bp)
Overview 1 RT 1: 52-3453 bp Neighborhood of RT #1 [52, 3458] RVT-UG17 PRK13981 nadE Feature: gene Location: 52-936 bp Ori: EPM68019.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 76-403 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 76-403 bp Feature: gene Location: 1107-2759 bp Ori: EPM68020.1 Feature: domain Description: PRK13981 Location: 1122-2748 bp Feature: domain Description: PRK13981 Location: 112 2 -2 748 bp Feature: gene Location: 3153-3458 bp Ori: EPM68021.1 Gene: nadE Feature: domain Description: nadE Location: 3156-3453 bp Feature: domain Description: nadE Location: 3156-3453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, PRK13981 (NAD synthetase; Provisional), nadE (TIGR00552)

Seq: AOJV01000142.1 Pseudomonas syringae pv. theae ICMP 3923 scaffold130, whole genome shotgun sequence (14763 bp)
Overview 1 RT 1: 11010-14543 bp Neighborhood of RT #1 [11010, 14650] TnpB_IS66 RVT-GII GIIM Feature: gene Location: 11010-12404 bp Feature: gene Location: 12655-12975 bp Ori: EPM69094.1 Feature: domain Description: TnpB_IS66 Location: 12742-12850 bp Feature: domain Description: TnpB_IS66 Location: 12742-12850 bp Feature: gene Location: 13382-14650 bp Ori: EPM69095.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13586-14243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 586-14243 bp Feature: domain Description: GIIM Note: maturase Location: 14321-14543 bp Feature: domain Description: GIIM Note: maturase Location: 143 21-14543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388)