myRT

myRT report for GCA_000416505.1_ASM41650v1

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Seq: AOJR01000739.1 Pseudomonas syringae pv. actinidiae ICMP 19073 scaffold256, whole genome shotgun sequence (7492 bp)
Overview 1 RT 1: 431-5258 bp Neighborhood of RT #1 [431, 5258] RVT-UG2 COG4951 SSL2 Feature: gene Location: 431-1531 bp Ori: EPM42926.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 446-1232 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 446-1 232 bp Feature: gene Location: 2343-4730 bp Ori: EPM42927.1 Feature: domain Description: COG4951 Location: 2352-3489 bp Feature: domain Description: COG4951 Location: 2352-3489 bp Feature: domain Description: SSL2 Location: 3525-4677 bp Feature: domain Description: SSL2 Location: 3525-4677 bp Feature: gene Location: 4902-5258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, COG4951 (Uncharacterized protein ), SSL2 (COG1061)

Seq: AOJR01000524.1 Pseudomonas syringae pv. actinidiae ICMP 19073 scaffold41, whole genome shotgun sequence (26857 bp)
Overview 1 RT 1: 13371-20834 bp Neighborhood of RT #1 [13371, 20896] COG4889 RVT-Retrons TAS_TAS_TAS_TIGR02293 Feature: gene Location: 13371-18275 bp Ori: EPM49935.1 Feature: domain Description: COG4889 Location: 13374-18258 bp Feature: domain Description: COG4889 Location: 13374-182 58 bp Feature: gene Location: 18684-18923 bp Feature: gene Location: 18999-20045 bp Ori: EPM49937.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19134-19701 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19134-19701 bp Feature: gene Location: 20057-20218 bp Feature: gene Location: 20519-20896 bp Ori: EPM49939.1 Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 20582-20834 bp Feature: domain Description: TAS_TAS_TAS_TIGR02 2 93 Location: 2 0582 -2 0834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4889 (Predicted helicase ), RVT-Retrons, TAS_TAS_TAS_TIGR02293

Seq: AOJR01000064.1 Pseudomonas syringae pv. actinidiae ICMP 19073 scaffold5, whole genome shotgun sequence (66356 bp)
Overview 1 RT 1: 1-1163 bp Neighborhood of RT #1 [1, 1163] RVT-GII Feature: gene Location: 1-317 bp Ori: EPM63471.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-3 13 bp Feature: gene Location: 788-976 bp Feature: gene Location: 975-1163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AOJR01000668.1 Pseudomonas syringae pv. actinidiae ICMP 19073 scaffold596, whole genome shotgun sequence (552 bp)
Overview 1 RT 1: 156-537 bp Neighborhood of RT #1 [156, 552] RVT-GII Feature: gene Location: 156-552 bp Ori: EPM43374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174-537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174 -537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII