myRT

myRT report for GCA_000416545.1_ASM41654v1

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Seq: AOKE01000230.1 Pseudomonas syringae pv. actinidiae ICMP 19098 scaffold235, whole genome shotgun sequence (1022 bp)
Overview 1 RT 1: 1-832 bp Neighborhood of RT #1 [1, 966] RVT-GII GIIM Feature: gene Location: 1-966 bp Ori: EPM43410.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0-547 bp Feature: domain Description: GIIM Note: maturase Location: 604-832 bp Feature: domain Description: GIIM Note: maturase Location: 604-832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AOKE01000170.1 Pseudomonas syringae pv. actinidiae ICMP 19098 scaffold146, whole genome shotgun sequence (10387 bp)
Overview 1 RT 1: 362-4192 bp Neighborhood of RT #1 [362, 4224] RVT-Retrons MscS Feature: gene Location: 362-1528 bp Ori: EPM45452.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 617-1238 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 617-12 38 bp Feature: gene Location: 1690-2946 bp Feature: gene Location: 3469-4224 bp Ori: EPM45454.1 Feature: domain Description: MscS Location: 3529-4192 bp Feature: domain Description: MscS Location: 352 9-4192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MscS (COG0668)

Seq: AOKE01000013.1 Pseudomonas syringae pv. actinidiae ICMP 19098 scaffold180, whole genome shotgun sequence (5498 bp)
Overview 1 RT 1: 208-4796 bp Neighborhood of RT #1 [208, 4796] RVT-UG15 SIRT5_Af1_CobB Feature: gene Location: 208-384 bp Feature: gene Location: 1842-3146 bp Ori: EPM52130.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1947-2358 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1947-23 58 bp Feature: gene Location: 3352-4206 bp Ori: EPM52131.1 Feature: domain Description: SIRT5_Af1_CobB Location: 3481-4168 bp Feature: domain Description: SIRT5_Af1_CobB Location: 3 481-4168 bp Feature: gene Location: 4461-4796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, SIRT5_Af1_CobB (cd01412)