myRT

myRT report for GCA_000416745.1_ASM41674v1

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Seq: AOKJ01000375.1 Pseudomonas syringae pv. actinidiae ICMP 19094 scaffold272, whole genome shotgun sequence (5483 bp)
Overview 1 RT 1: 698-5286 bp Neighborhood of RT #1 [698, 5286] SIRT5_Af1_CobB RVT-UG15 Feature: gene Location: 698-1033 bp Feature: gene Location: 1288-2142 bp Ori: EPN47995.1 Feature: domain Description: SIRT5_Af1_CobB Location: 1417-2104 bp Feature: domain Description: SIRT5_Af1 _CobB Location: 1 41 7-21 04 bp Feature: gene Location: 2348-3994 bp Ori: EPN47996.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2795-3206 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 2795-3206 bp Feature: gene Location: 5110-5286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIRT5_Af1_CobB (cd01412), RVT-UG15

Seq: AOKJ01000407.1 Pseudomonas syringae pv. actinidiae ICMP 19094 scaffold357, whole genome shotgun sequence (1596 bp)
Overview 1 RT 1: 255-1170 bp Neighborhood of RT #1 [255, 1370] RVT-GII Feature: gene Location: 255-1370 bp Ori: EPN47574.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588-1170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AOKJ01000105.1 Pseudomonas syringae pv. actinidiae ICMP 19094 scaffold64, whole genome shotgun sequence (28128 bp)
Overview 1 RT 1: 15422-21566 bp Neighborhood of RT #1 [15422, 21646] MscS RVT-Retrons DUF4427 Pentapeptide Pentapeptide Pentapeptide Feature: gene Location: 15422-16177 bp Ori: EPN52895.1 Feature: domain Description: MscS Location: 15482-16145 bp Feature: domain Description: MscS Location: 15482-16145 bp Feature: gene Location: 16700-17956 bp Feature: gene Location: 18118-19284 bp Ori: EPN52897.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18373-18994 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 183 73 -18994 bp Feature: gene Location: 19488-20711 bp Ori: EPN52898.1 Feature: domain Description: DUF4427 Location: 20406-20691 bp Feature: domain Description: DUF4427 Location: 20406-20691 bp Feature: gene Location: 21116-21646 bp Ori: EPN52899.1 Feature: domain Description: Pentapeptide Location: 21233-21344 bp Feature: domain Description: Pentapeptide Location: 2123 3 -213 44 bp Feature: domain Description: Pentapeptide Location: 21350-21455 bp Feature: domain Description: Pentapeptide Location: 213 50-21455 bp Feature: domain Description: Pentapeptide Location: 21470-21566 bp Feature: domain Description: Pentapeptide Location: 21470-21566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MscS (COG0668), RVT-Retrons, DUF4427 (pfam14468), Pentapeptide (pfam00805)