myRT

myRT report for GCA_000416805.1_ASM41680v1

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Seq: AOKD01000209.1 Pseudomonas syringae pv. actinidiae ICMP 19099 scaffold87, whole genome shotgun sequence (26702 bp)
Overview 1 RT 1: 5081-11273 bp Neighborhood of RT #1 [5081, 11305] Pentapeptide Pentapeptide Pentapeptide DUF4427 RVT-Retrons MscS Feature: gene Location: 5081-5611 bp Ori: EPN24759.1 Feature: domain Description: Pentapeptide Location: 5198-5309 bp Feature: domain Description: Pentapeptide Location: 51 98-5309 bp Feature: domain Description: Pentapeptide Location: 5315-5420 bp Feature: domain Description: Pentapeptide Location: 531 5-5420 bp Feature: domain Description: Pentapeptide Location: 5435-5531 bp Feature: domain Description: Pentapeptide Location: 5435-5531 bp Feature: gene Location: 6016-7239 bp Ori: EPN24760.1 Feature: domain Description: DUF4427 Location: 6934-7219 bp Feature: domain Description: DUF4427 Location: 6934-721 9 bp Feature: gene Location: 7443-8609 bp Ori: EPN24761.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7698-8319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7698-831 9 bp Feature: gene Location: 8771-10027 bp Feature: gene Location: 10550-11305 bp Ori: EPN24763.1 Feature: domain Description: MscS Location: 10610-11273 bp Feature: domain Description: MscS Location: 1 061 0-1 1 273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pentapeptide (pfam00805), DUF4427 (pfam14468), RVT-Retrons, MscS (COG0668)

Seq: AOKD01000020.1 Pseudomonas syringae pv. actinidiae ICMP 19099 scaffold199, whole genome shotgun sequence (5486 bp)
Overview 1 RT 1: 207-4795 bp Neighborhood of RT #1 [207, 4795] RVT-UG15 SIRT5_Af1_CobB Feature: gene Location: 207-383 bp Feature: gene Location: 1499-3145 bp Ori: EPN29332.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1946-2357 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1946-2 357 bp Feature: gene Location: 3351-4205 bp Ori: EPN29333.1 Feature: domain Description: SIRT5_Af1_CobB Location: 3480-4167 bp Feature: domain Description: SIRT5_Af1_CobB Location: 3480-4167 bp Feature: gene Location: 4460-4795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, SIRT5_Af1_CobB (cd01412)