myRT

myRT report for GCA_000417625.1_Vibrio_fluvalis_PG41

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Seq: ASXS01000001.1 Vibrio fluvialis PG41 contig1, whole genome shotgun sequence (813076 bp)
Overview 1 RT 1: 260251-270143 bp Neighborhood of RT #1 [260251, 270148] PRK11174 PRK11160 RVT-UG5 nitrilase PRK10700 PRK11630 Feature: gene Location: 260251-262038 bp Ori: EPP25098.1 Feature: domain Description: PRK11174 Location: 260254-262003 bp Feature: domain Description: PRK1 1 1 74 Location: 260254-262003 bp Feature: gene Location: 262031-263752 bp Ori: EPP25099.1 Feature: domain Description: PRK11160 Location: 262034-263747 bp Feature: domain Description: PRK1 1 1 60 Location: 262034-263747 bp Feature: gene Location: 264430-267408 bp Ori: EPP25100.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 264952-265420 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 264952-265420 bp Feature: domain Description: nitrilase Location: 266728-267334 bp Feature: domain Description: nitrilase Location: 266728-267334 bp Feature: gene Location: 268425-269381 bp Ori: EPP25101.1 Feature: domain Description: PRK10700 Location: 268428-269283 bp Feature: domain Description: PRK1 0700 Location: 268428-269283 bp Feature: gene Location: 269528-270148 bp Ori: EPP25102.1 Feature: domain Description: PRK11630 Location: 269531-270143 bp Feature: domain Description: PRK1 1 630 Location: 269531 -2701 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11174 (cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed), PRK11160 (cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed), RVT-UG5, nitrilase (cl11424), PRK10700 (23S rRNA pseudouridine(2605) synthase RluB), PRK11630 (threonylcarbamoyl-AMP synthase)

Seq: ASXS01000005.1 Vibrio fluvialis PG41 contig5, whole genome shotgun sequence (360176 bp)
Overview 1 RT 1: 52505-57957 bp Neighborhood of RT #1 [52505, 57959] TIGR02646 COG3950 RVT-Retrons YjbI YjbI PRK11295 Feature: gene Location: 52505-53278 bp Ori: EPP23668.1 Feature: domain Description: TIGR02646 Location: 52580-53108 bp Feature: domain Description: TIGR02 646 Location: 52 580-53108 bp Feature: gene Location: 53265-54890 bp Ori: EPP23669.1 Feature: domain Description: COG3950 Location: 53448-54804 bp Feature: domain Description: COG3950 Location: 53448-54804 bp Feature: gene Location: 54883-55827 bp Ori: EPP23670.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54982-55579 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54982 -55579 bp Feature: gene Location: 56692-57348 bp Ori: EPP23671.1 Feature: domain Description: YjbI Location: 56701-57010 bp Feature: domain Description: YjbI Location: 56701-57010 bp Feature: domain Description: YjbI Location: 57025-57283 bp Feature: domain Description: YjbI Location: 5702 5-572 83 bp Feature: gene Location: 57615-57959 bp Ori: EPP23672.1 Feature: domain Description: PRK11295 Location: 57642-57957 bp Feature: domain Description: PRK112 95 Location: 57642 -57957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, YjbI (COG2346), PRK11295 (HNH nuclease family protein)