myRT

myRT report for GCA_000419315.1_Europe

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Seq: ANPL01000002.1 Mycobacterium marinum str. Europe scaffold2, whole genome shotgun sequence (1669321 bp)
Overview 1 RT 1: 388640-400650 bp 2 RT 2: 1348096-1354032 bp Neighborhood of RT #1 [388640, 400670] PE PE_PPE_C RVT-UG12 INT_ICEBs1_C_like PRK06526 HTH_23 COG4584 PHA02517 RVT-GII GIIM AcyC Neighborhood of RT #2 [1348096, 1354032] RnaI RVT-CRISPR-like YHI9 Feature: gene Location: 388640-389446 bp Ori: EPQ74193.1 Feature: domain Description: PE Location: 388646-388898 bp Feature: domain Description: PE Location: 388646-388898 bp Feature: domain Description: PE_PPE_C Location: 389195-389435 bp Feature: domain Description: PE_PPE_C Location: 3891 95-389435 bp Feature: gene Location: 390258-390374 bp Feature: gene Location: 390379-391920 bp Ori: EPQ74195.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 390718-391150 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 39071 8-391 1 50 bp Feature: gene Location: 391963-392271 bp Ori: EPQ74196.1 Feature: domain Description: INT_ICEBs1_C_like Location: 391996-392173 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 391 996-3921 73 bp Feature: gene Location: 392379-393191 bp Ori: EPQ74197.1 Feature: domain Description: PRK06526 Location: 392466-393162 bp Feature: domain Description: PRK06526 Location: 392466-3931 62 bp Feature: gene Location: 393188-394756 bp Ori: EPQ74198.1 Feature: domain Description: HTH_23 Location: 393245-393380 bp Feature: domain Description: HTH_23 Location: 393245-393380 bp Feature: domain Description: COG4584 Location: 393512-394103 bp Feature: domain Description: COG4584 Location: 39351 2-3941 03 bp Feature: gene Location: 394847-395173 bp Ori: EPQ74199.1 Feature: domain Description: PHA02517 Location: 395012-395150 bp Feature: domain Description: PHA0251 7 Location: 39501 2-3951 50 bp Feature: gene Location: 395131-396579 bp Ori: EPQ74200.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395449-396136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395449-3961 36 bp Feature: domain Description: GIIM Note: maturase Location: 396211-396406 bp Feature: domain Description: GIIM Note: maturase Location: 39621 1 -396406 bp Feature: gene Location: 397356-398765 bp Feature: gene Location: 399138-400670 bp Ori: EPQ74202.1 Feature: domain Description: AcyC Location: 399960-400650 bp Feature: domain Description: AcyC Location: 399960-400650 bp Feature: gene Location: 1348096-1348878 bp Ori: EPQ75048.1 Feature: domain Description: RnaI Location: 1348198-1348777 bp Feature: domain Description: RnaI Location: 1 3481 98-1 348777 bp Feature: gene Location: 1349043-1351133 bp Feature: gene Location: 1351126-1352457 bp Ori: EPQ75050.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1351366-1351987 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 351 366-1 351 987 bp Feature: gene Location: 1352694-1353536 bp Ori: EPQ75051.1 Feature: domain Description: YHI9 Location: 1352706-1353528 bp Feature: domain Description: YHI9 Location: 1 352706-1 353528 bp Feature: gene Location: 1353616-1354032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PE (pfam00934), PE_PPE_C (pfam12484), RVT-UG12, INT_ICEBs1_C_like (cd01189), PRK06526 (transposase; Provisional), HTH_23 (pfam13384), COG4584 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)
AcyC (COG2114), RnaI (COG3719), RVT-CRISPR, YHI9 (COG0384)