myRT

myRT report for GCA_000419665.1_ASM41966v1

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Seq: ATTL01000045.1 Sinorhizobium medicae DI28 YU5DRAFT_scaffold_44.45_C, whole genome shotgun sequence (26533 bp)
Overview 1 RT 1: 11980-17263 bp Neighborhood of RT #1 [11980, 17274] Transposase_mut RVT-GII CheB-CheR_fusion CheR_N MeTrc PAS PAS_10 HWE_HK Feature: gene Location: 11980-12201 bp Feature: gene Location: 12343-12867 bp Feature: domain Description: Transposase_mut Location: 12355-12832 bp Feature: domain Description: Transposase_mut Location: 1 2355-1 2832 bp Feature: gene Location: 13438-13914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13741-13867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3741 -1 3867 bp Feature: gene Location: 14357-15496 bp Feature: domain Description: CheB-CheR_fusion Location: 14627-15167 bp Feature: domain Description: CheB-CheR_fusion Location: 1 4627-1 51 67 bp Feature: domain Description: CheR_N Location: 15260-15401 bp Feature: domain Description: CheR_N Location: 1 5260-1 5401 bp Feature: gene Location: 15595-17274 bp Feature: domain Description: MeTrc Location: 15613-16024 bp Feature: domain Description: MeTrc Location: 1 561 3-1 6024 bp Feature: domain Description: PAS Location: 16156-16465 bp Feature: domain Description: PAS Location: 1 61 56-1 6465 bp Feature: domain Description: PAS_10 Location: 16786-17104 bp Feature: domain Description: PAS_1 0 Location: 1 6786-1 71 04 bp Feature: domain Description: HWE_HK Location: 17149-17263 bp Feature: domain Description: HWE_HK Location: 1 71 49-1 7263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, CheB-CheR_fusion (cd16434), CheR_N (pfam03705), MeTrc (smart00138), PAS (smart00091), PAS_10 (pfam13596), HWE_HK (smart00911)

Seq: ATTL01000057.1 Sinorhizobium medicae DI28 YU5DRAFT_scaffold_56.57_C, whole genome shotgun sequence (16146 bp)
Overview 1 RT 1: 1449-7976 bp Neighborhood of RT #1 [1449, 7976] DNA2 TPR TPR CHAT RVT-UG20 Feature: gene Location: 1449-1664 bp Feature: domain Description: DNA2 Location: 1470-1650 bp Feature: domain Description: DNA2 Location: 1470-1650 bp Feature: gene Location: 1817-5605 bp Feature: domain Description: TPR Location: 2600-2915 bp Feature: domain Description: TPR Location: 2 600-2 915 bp Feature: domain Description: TPR Location: 3716-3905 bp Feature: domain Description: TPR Location: 3716-3905 bp Feature: domain Description: CHAT Location: 4859-5513 bp Feature: domain Description: CHAT Location: 4859-5513 bp Feature: gene Location: 5820-6773 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 6168-6666 bp Feature: RT Description: RVT-UG2 0 Note: UG2 0 RT Location: 6168-6666 bp Feature: gene Location: 6873-7433 bp Feature: gene Location: 7506-7976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA2 (COG1112), TPR (smart00028), CHAT (pfam12770), RVT-UG20