myRT

myRT report for GCA_000420325.1_ASM42032v1

Download annotations/find similar RTs

Seq: ATUS01000001.1 Spongiibacter tropicus DSM 19543 G411DRAFT_scaffold00001.1_C, whole genome shotgun sequence (2483318 bp)
Overview 1 RT 1: 1576623-1583343 bp Neighborhood of RT #1 [1576623, 1583345] GppA RVT-UG8 BLUF PRK02866 Feature: gene Location: 1576623-1578143 bp Feature: domain Description: GppA Location: 1576644-1578078 bp Feature: domain Description: GppA Location: 1 576644-1 578078 bp Feature: gene Location: 1578594-1578731 bp Feature: gene Location: 1580311-1582248 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1580806-1581247 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 580806-1 581 247 bp Feature: gene Location: 1582395-1582814 bp Feature: domain Description: BLUF Location: 1582404-1582677 bp Feature: domain Description: BLUF Location: 1 582404-1 582677 bp Feature: gene Location: 1582902-1583345 bp Feature: domain Description: PRK02866 Location: 1582914-1583343 bp Feature: domain Description: PRK02866 Location: 1 58291 4-1 583343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GppA (COG0248), RVT-UG8, BLUF (smart01034), PRK02866 (cyanate hydratase; Validated)

Seq: ATUS01000004.1 Spongiibacter tropicus DSM 19543 G411DRAFT_scaffold00004.4_C, whole genome shotgun sequence (291644 bp)
Overview 1 RT 1: 134092-141503 bp Neighborhood of RT #1 [134092, 141503] Peptidases_S53_like AAA_13 AAA_13 RVT-Retrons HTH_XRE Feature: gene Location: 134092-136503 bp Feature: domain Description: Peptidases_S53_like Location: 134599-136054 bp Feature: domain Description: Peptidases_S53_like Location: 134599-136054 bp Feature: gene Location: 137206-139881 bp Feature: domain Description: AAA_13 Location: 137560-137656 bp Feature: domain Description: AAA_13 Location: 137560-137656 bp Feature: domain Description: AAA_13 Location: 138403-139345 bp Feature: domain Description: AAA_13 Location: 138403-139345 bp Feature: gene Location: 139980-140939 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140130-140691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140130-140691 bp Feature: gene Location: 140905-141210 bp Feature: domain Description: HTH_XRE Location: 140917-141082 bp Feature: domain Description: HTH_XRE Location: 140917-141082 bp Feature: gene Location: 141264-141503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S53_like (cd05562), AAA_13 (pfam13166), RVT-Retrons, HTH_XRE (smart00530)