myRT

myRT report for GCA_000420625.1_ASM42062v1

Download annotations/find similar RTs

Seq: ATVH01000011.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00001.1_C, whole genome shotgun sequence (755816 bp)
Overview 1 RT 1: 418840-422333 bp 2 RT 2: 636761-644934 bp Neighborhood of RT #1 [418840, 422335] RVT-DGRs Avd_like PHA00653 Neighborhood of RT #2 [636761, 644957] COG5452 BamE RVT-GII GIIM OVP1 TMAO_torS Tar Feature: gene Location: 418840-419193 bp Feature: gene Location: 419341-419634 bp Feature: gene Location: 419634-420887 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 420030-420705 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 420030-420705 bp Feature: gene Location: 420929-421273 bp Feature: domain Description: Avd_like Location: 420953-421253 bp Feature: domain Description: Avd_like Location: 420953-421 253 bp Feature: gene Location: 421298-422335 bp Feature: domain Description: PHA00653 Location: 421490-422333 bp Feature: domain Description: PHA00653 Location: 421 490-422333 bp Feature: gene Location: 636761-637324 bp Feature: domain Description: COG5452 Location: 636764-637298 bp Feature: domain Description: COG5452 Location: 636764-637298 bp Feature: gene Location: 637438-638007 bp Feature: domain Description: BamE Location: 637492-637900 bp Feature: domain Description: BamE Location: 637492-637900 bp Feature: gene Location: 638115-639494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 638460-639075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 638460-639075 bp Feature: domain Description: GIIM Note: maturase Location: 639129-639354 bp Feature: domain Description: GIIM Note: maturase Location: 6391 29-639354 bp Feature: gene Location: 639950-642049 bp Feature: domain Description: OVP1 Location: 639956-642044 bp Feature: domain Description: OVP1 Location: 639956-642044 bp Feature: gene Location: 642243-644957 bp Feature: domain Description: TMAO_torS Location: 642417-643242 bp Feature: domain Description: TMAO_torS Location: 64241 7-643242 bp Feature: domain Description: Tar Location: 643734-644934 bp Feature: domain Description: Tar Location: 643734-644934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant), COG5452 (Uncharacterized protein ), BamE (COG2913), RVT-GII, GIIM (pfam08388), OVP1 (COG3808), TMAO_torS (TIGR02956), Tar (COG0840)

Seq: ATVH01000019.1 Fodinicurvata sediminis DSM 21159 G502DRAFT_scaffold00008.8_C, whole genome shotgun sequence (175247 bp)
Overview 1 RT 1: 52658-56005 bp Neighborhood of RT #1 [52658, 56005] PHA00653 Avd_like RVT-DGRs Feature: gene Location: 52658-53656 bp Feature: domain Description: PHA00653 Location: 52829-53636 bp Feature: domain Description: PHA00653 Location: 52 82 9-53636 bp Feature: gene Location: 53678-54022 bp Feature: domain Description: Avd_like Location: 53702-54002 bp Feature: domain Description: Avd_like Location: 53702 -54002 bp Feature: gene Location: 54271-55317 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54460-55138 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54460-55138 bp Feature: gene Location: 55317-55610 bp Feature: gene Location: 55640-56005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs