myRT

myRT report for GCA_000421005.1_ASM42100v1

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Seq: ATWA01000039.1 Clostridiales bacterium NK3B98 G618DRAFT_scaffold00039.39_C, whole genome shotgun sequence (24549 bp)
Overview 1 RT 1: 112-9245 bp Neighborhood of RT #1 [112, 9325] RVT_N RVT-GII YkfC YtxK COG4646 HELICc Feature: gene Location: 112-1776 bp Feature: domain Description: RVT_N Location: 157-400 bp Feature: domain Description: RVT_N Location: 1 57-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1 093 bp Feature: domain Description: YkfC Location: 1276-1396 bp Feature: domain Description: YkfC Location: 1 276-1 396 bp Feature: gene Location: 2187-2339 bp Feature: gene Location: 2375-9325 bp Feature: domain Description: YtxK Location: 5741-6161 bp Feature: domain Description: YtxK Location: 5741 -61 61 bp Feature: domain Description: COG4646 Location: 6218-8831 bp Feature: domain Description: COG4646 Location: 621 8-8831 bp Feature: domain Description: HELICc Location: 8882-9245 bp Feature: domain Description: HELICc Location: 8882-9245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490)

Seq: ATWA01000045.1 Clostridiales bacterium NK3B98 G618DRAFT_scaffold00045.45_C, whole genome shotgun sequence (22767 bp)
Overview 1 RT 1: 212-3557 bp Neighborhood of RT #1 [212, 3557] RVT_N RVT-GII YkfC Feature: gene Location: 212-340 bp Feature: gene Location: 624-2288 bp Feature: domain Description: RVT_N Location: 669-912 bp Feature: domain Description: RVT_N Location: 669-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1605 bp Feature: domain Description: YkfC Location: 1788-1908 bp Feature: domain Description: YkfC Location: 1788-1908 bp Feature: gene Location: 2369-3223 bp Feature: gene Location: 3312-3557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: ATWA01000079.1 Clostridiales bacterium NK3B98 G618DRAFT_scaffold00079.79_C, whole genome shotgun sequence (9176 bp)
Overview 1 RT 1: 6214-8685 bp Neighborhood of RT #1 [6214, 9065] DUF2249 RVT_N RVT-GII YkfC Feature: gene Location: 6214-6807 bp Feature: domain Description: DUF2249 Location: 6247-6364 bp Feature: domain Description: DUF2249 Location: 6247-63 64 bp Feature: gene Location: 6989-7117 bp Feature: gene Location: 7401-9065 bp Feature: domain Description: RVT_N Location: 7446-7689 bp Feature: domain Description: RVT_N Location: 7446-7689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7734-8382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773 4-83 82 bp Feature: domain Description: YkfC Location: 8565-8685 bp Feature: domain Description: YkfC Location: 8565-8685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2249 (pfam10006), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: ATWA01000093.1 Clostridiales bacterium NK3B98 G618DRAFT_scaffold00093.93_C, whole genome shotgun sequence (5181 bp)
Overview 1 RT 1: 212-4050 bp Neighborhood of RT #1 [212, 4082] RVT_N RVT-GII YkfC NapF Crp Feature: gene Location: 212-340 bp Feature: gene Location: 347-832 bp Feature: gene Location: 624-2288 bp Feature: domain Description: RVT_N Location: 669-912 bp Feature: domain Description: RVT_N Location: 669-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1605 bp Feature: domain Description: YkfC Location: 1788-1908 bp Feature: domain Description: YkfC Location: 1788-1908 bp Feature: gene Location: 2518-3279 bp Feature: domain Description: NapF Location: 2530-2737 bp Feature: domain Description: NapF Location: 2530-2737 bp Feature: gene Location: 3408-4082 bp Feature: domain Description: Crp Location: 3471-4050 bp Feature: domain Description: Crp Location: 34 71-4 050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), NapF (COG1145), Crp (pfam00325)

Seq: ATWA01000107.1 Clostridiales bacterium NK3B98 G618DRAFT_scaffold00107.107_C, whole genome shotgun sequence (3275 bp)
Overview 1 RT 1: 260-3057 bp Neighborhood of RT #1 [260, 3057] RVT-UG2 Feature: gene Location: 260-439 bp Feature: gene Location: 559-801 bp Feature: gene Location: 841-2217 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1051-1885 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 105 1-1885 bp Feature: gene Location: 2401-2529 bp Feature: gene Location: 2884-3057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2