myRT

myRT report for GCA_000422285.1_ASM42228v1

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Seq: AULM01000056.1 Desulfatiglans anilini DSM 4660 H567DRAFT_scaffold00054.54_C, whole genome shotgun sequence (15158 bp)
Overview 1 RT 1: 7860-11899 bp Neighborhood of RT #1 [7860, 11899] GlcD PRK11230 GlcD RVT-GII Feature: gene Location: 7860-9311 bp Feature: domain Description: GlcD Location: 7881-8226 bp Feature: domain Description: GlcD Location: 7881 -8226 bp Feature: domain Description: PRK11230 Location: 8433-8616 bp Feature: domain Description: PRK1 1 230 Location: 8433-861 6 bp Feature: domain Description: GlcD Location: 9234-9306 bp Feature: domain Description: GlcD Location: 9234-9306 bp Feature: gene Location: 9604-9900 bp Feature: gene Location: 9935-11266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10235-10919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0235-1 091 9 bp Feature: gene Location: 11328-11621 bp Feature: gene Location: 11624-11899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlcD (COG0277), PRK11230 (glycolate oxidase subunit GlcD; Provisional), RVT-GII

Seq: AULM01000083.1 Desulfatiglans anilini DSM 4660 H567DRAFT_scaffold00081.81_C, whole genome shotgun sequence (4689 bp)
Overview 1 RT 1: 1-3986 bp Neighborhood of RT #1 [1, 4027] COG4584 RVT-GII GIIM RVT-GII GIIM COG5340 AbiEii Feature: gene Location: 1-432 bp Feature: domain Description: COG4584 Location: 70-313 bp Feature: domain Description: COG4584 Location: 70-313 bp Feature: gene Location: 586-1431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592-1045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 -1045 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1357 bp Feature: domain Description: GIIM Note: maturase Location: 112 6-1357 bp Feature: gene Location: 1547-2104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556-1655 bp Feature: domain Description: GIIM Note: maturase Location: 1706-1904 bp Feature: domain Description: GIIM Note: maturase Location: 1706-1904 bp Feature: gene Location: 2360-3187 bp Feature: domain Description: COG5340 Location: 2420-3170 bp Feature: domain Description: COG5340 Location: 2 42 0-3170 bp Feature: gene Location: 3191-4027 bp Feature: domain Description: AbiEii Location: 3296-3986 bp Feature: domain Description: AbiEii Location: 32 96-3986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843)