myRT

myRT report for GCA_000423765.1_ASM42376v1

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Seq: AUIP01000019.1 Streptococcus porci DSM 23759 G576DRAFT_scaffold00017.17_C, whole genome shotgun sequence (42202 bp)
Overview 1 RT 1: 14612-18441 bp Neighborhood of RT #1 [14612, 18668] PRK00549 RVT-GII GIIM YdiL HTH_XRE Feature: gene Location: 14612-15883 bp Feature: domain Description: PRK00549 Location: 14615-15863 bp Feature: domain Description: PRK00549 Location: 1 461 5-1 5863 bp Feature: gene Location: 16186-16620 bp Feature: gene Location: 16861-17472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16876-17014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6876-1 701 4 bp Feature: domain Description: GIIM Note: maturase Location: 17068-17281 bp Feature: domain Description: GIIM Note: maturase Location: 1 7068-1 7281 bp Feature: gene Location: 17620-18285 bp Feature: domain Description: YdiL Location: 17647-18271 bp Feature: domain Description: YdiL Location: 1 7647-1 8271 bp Feature: gene Location: 18258-18668 bp Feature: domain Description: HTH_XRE Location: 18270-18441 bp Feature: domain Description: HTH_XRE Location: 1 8270-1 8441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00549 (competence damage-inducible protein A; Provisional), RVT-GII, GIIM (pfam08388), YdiL (COG1266), HTH_XRE (smart00530)

Seq: AUIP01000021.1 Streptococcus porci DSM 23759 G576DRAFT_scaffold00019.19_C, whole genome shotgun sequence (27346 bp)
Overview 1 RT 1: 12096-21386 bp Neighborhood of RT #1 [12096, 21394] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 12096-12647 bp Feature: gene Location: 12684-18158 bp Feature: domain Description: N6_Mtase Location: 14709-15297 bp Feature: domain Description: N6_Mtase Location: 14709-152 97 bp Feature: domain Description: COG4646 Location: 15894-18015 bp Feature: domain Description: COG4646 Location: 15894-18015 bp Feature: gene Location: 18656-20434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18917-19709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18917-19709 bp Feature: domain Description: Intron_maturas2 Location: 19814-20045 bp Feature: domain Description: Intron_maturas2 Location: 19814-2 0045 bp Feature: domain Description: HNHc Note: nucleases Location: 20210-20396 bp Feature: domain Description: HNHc Note: nucleases Location: 2 02 10-2 0396 bp Feature: gene Location: 20578-21039 bp Feature: domain Description: SF2_C_SNF Location: 20818-20962 bp Feature: domain Description: SF2 _C_SNF Location: 2 0818-2 0962 bp Feature: gene Location: 21020-21394 bp Feature: domain Description: TnpV Location: 21056-21386 bp Feature: domain Description: TnpV Location: 2 1056-2 1386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)