myRT

myRT report for GCA_000424025.1_ASM42402v1

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Seq: AUJC01000001.1 Clostridium paraputrificum AGR2156 G594DRAFT_scaffold00001.1_C, whole genome shotgun sequence (719109 bp)
Overview 1 RT 1: 216754-221843 bp Neighborhood of RT #1 [216754, 221857] HTH_19 TPR TPR TPR HTH_XRE TPR_MalT TPR_MalT RVT-GII GvpP Feature: gene Location: 216754-218016 bp Feature: domain Description: HTH_19 Location: 216775-216961 bp Feature: domain Description: HTH_1 9 Location: 21 6775-21 6961 bp Feature: domain Description: TPR Location: 217195-217408 bp Feature: domain Description: TPR Location: 21 71 95-21 7408 bp Feature: domain Description: TPR Location: 217573-217876 bp Feature: domain Description: TPR Location: 21 7573-21 7876 bp Feature: domain Description: TPR Location: 217924-217999 bp Feature: domain Description: TPR Location: 21 7924-21 7999 bp Feature: gene Location: 218036-219418 bp Feature: domain Description: HTH_XRE Location: 218138-218306 bp Feature: domain Description: HTH_XRE Location: 21 81 38-21 8306 bp Feature: domain Description: TPR_MalT Location: 218336-218696 bp Feature: domain Description: TPR_MalT Location: 21 8336-21 8696 bp Feature: domain Description: TPR_MalT Location: 218711-219308 bp Feature: domain Description: TPR_MalT Location: 21 871 1 -21 9308 bp Feature: gene Location: 220163-220774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220166-220727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2201 66-220727 bp Feature: gene Location: 220916-221182 bp Feature: gene Location: 221648-221857 bp Feature: domain Description: GvpP Location: 221687-221843 bp Feature: domain Description: GvpP Location: 221 687-221 843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), TPR (smart00028), HTH_XRE (smart00530), TPR_MalT (pfam17874), RVT-GII, GvpP (COG4980)