myRT

myRT report for GCA_000424445.1_ASM42444v1

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Seq: AUJX01000011.1 Oribacterium sp. NK2B42 G625DRAFT_scaffold00010.10_C, whole genome shotgun sequence (94301 bp)
Overview 1 RT 1: 24111-27524 bp Neighborhood of RT #1 [24111, 27524] Acyl_transf_3 RVT-GII GIIM Feature: gene Location: 24111-24458 bp Feature: gene Location: 24874-25956 bp Feature: domain Description: Acyl_transf_3 Location: 24895-25900 bp Feature: domain Description: Acyl_transf_3 Location: 24895-25900 bp Feature: gene Location: 26140-26805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26155-26446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 55-26446 bp Feature: domain Description: GIIM Note: maturase Location: 26506-26731 bp Feature: domain Description: GIIM Note: maturase Location: 26506-26731 bp Feature: gene Location: 26693-26983 bp Feature: gene Location: 26916-27524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acyl_transf_3 (pfam01757), RVT-GII, GIIM (pfam08388)

Seq: AUJX01000077.1 Oribacterium sp. NK2B42 G625DRAFT_scaffold00070.70_C, whole genome shotgun sequence (6811 bp)
Overview 1 RT 1: 3000-6808 bp Neighborhood of RT #1 [3000, 6808] vWA_subgroup Macro_Appr_pase_like HTH_XRE RVT-UG26 Feature: gene Location: 3000-3677 bp Feature: domain Description: vWA_subgroup Location: 3024-3480 bp Feature: domain Description: vWA_subgroup Location: 302 4-3480 bp Feature: gene Location: 3808-4941 bp Feature: domain Description: Macro_Appr_pase_like Location: 3820-4285 bp Feature: domain Description: Macro_Appr_pase_like Location: 382 0-42 85 bp Feature: domain Description: HTH_XRE Location: 4627-4786 bp Feature: domain Description: HTH_XRE Location: 462 7-4786 bp Feature: gene Location: 4966-6186 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5167-5782 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 5167-5782 bp Feature: gene Location: 6593-6808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT vWA_subgroup (cd01465), Macro_Appr_pase_like, HTH_XRE (smart00530), RVT-UG26