myRT

myRT report for GCA_000424585.1_ASM42458v1

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Seq: AUKE01000005.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00004.4_C, whole genome shotgun sequence (248497 bp)
Overview 1 RT 1: 1-2033 bp Neighborhood of RT #1 [1, 2033] INT_RitC_C_like RVT-UG2 Feature: gene Location: 1-186 bp Feature: domain Description: INT_RitC_C_like Location: 4-100 bp Feature: domain Description: INT_RitC_C_like Location: 4-1 00 bp Feature: gene Location: 225-1031 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 435-957 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 435-957 bp Feature: gene Location: 1146-1385 bp Feature: gene Location: 1395-2033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitC_C_like (cd01182), RVT-UG2

Seq: AUKE01000021.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00019.19_C, whole genome shotgun sequence (61370 bp)
Overview 1 RT 1: 1-2999 bp Neighborhood of RT #1 [1, 3013] RVT-GII amt GlnK Feature: gene Location: 1-639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-640 bp Feature: gene Location: 699-851 bp Feature: gene Location: 1202-3013 bp Feature: domain Description: amt Location: 1289-2489 bp Feature: domain Description: amt Location: 12 89-2 489 bp Feature: domain Description: GlnK Location: 2666-2999 bp Feature: domain Description: GlnK Location: 2 666-2 999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, amt (TIGR00836), GlnK (COG0347)

Seq: AUKE01000027.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00025.25_C, whole genome shotgun sequence (44682 bp)
Overview 1 RT 1: 39630-44680 bp Neighborhood of RT #1 [39630, 44680] PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF RVT-UG2 Feature: gene Location: 39630-40325 bp Feature: gene Location: 40330-43563 bp Feature: domain Description: PLDc_N_DEXD_c Location: 40351-40804 bp Feature: domain Description: PLDc_N_DEXD_c Location: 403 51-40804 bp Feature: domain Description: DEXDc_RapA Location: 41062-41620 bp Feature: domain Description: DEXDc_RapA Location: 41062-41620 bp Feature: domain Description: SF2_C_SNF Location: 42196-42820 bp Feature: domain Description: SF2_C_SNF Location: 42196-42820 bp Feature: gene Location: 43712-44302 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43715-43982 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43 715-43 982 bp Feature: gene Location: 44444-44680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), RVT-UG2

Seq: AUKE01000029.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00027.27_C, whole genome shotgun sequence (42532 bp)
Overview 1 RT 1: 1-1590 bp Neighborhood of RT #1 [1, 1592] RVT-GII rpsI Feature: gene Location: 1-639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-64 0 bp Feature: gene Location: 699-851 bp Feature: gene Location: 1170-1592 bp Feature: domain Description: rpsI Location: 1206-1590 bp Feature: domain Description: rpsI Location: 1206-1590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rpsI (PRK00132)

Seq: AUKE01000032.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00030.30_C, whole genome shotgun sequence (16125 bp)
Overview 1 RT 1: 152-7123 bp Neighborhood of RT #1 [152, 7164] RVT-GII GIIM PRK05793 KOG0399 Feature: gene Location: 152-715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158-263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 8-263 bp Feature: domain Description: GIIM Note: maturase Location: 317-536 bp Feature: domain Description: GIIM Note: maturase Location: 317-5 36 bp Feature: gene Location: 818-2197 bp Feature: domain Description: PRK05793 Location: 827-2195 bp Feature: domain Description: PRK05 793 Location: 827-2195 bp Feature: gene Location: 2614-7164 bp Feature: domain Description: KOG0399 Location: 2641-7123 bp Feature: domain Description: KOG0399 Location: 2641-7123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK05793 (amidophosphoribosyltransferase; Provisional), KOG0399 (KOG0399, Glutamate synthase )

Seq: AUKE01000034.1 Butyrivibrio sp. MC2013 G636DRAFT_scaffold00032.32_C, whole genome shotgun sequence (13343 bp)
Overview 1 RT 1: 10354-13082 bp Neighborhood of RT #1 [10354, 13261] EndoU_bacteria COG3177 RVT-GII GIIM Feature: gene Location: 10354-10842 bp Feature: domain Description: EndoU_bacteria Location: 10459-10807 bp Feature: domain Description: EndoU_bacteria Location: 10459-10807 bp Feature: gene Location: 11142-12233 bp Feature: domain Description: COG3177 Location: 11319-12201 bp Feature: domain Description: COG3177 Location: 11319-12201 bp Feature: gene Location: 12629-13261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12635-12809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126 35-12809 bp Feature: domain Description: GIIM Note: maturase Location: 12863-13082 bp Feature: domain Description: GIIM Note: maturase Location: 1286 3-13082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EndoU_bacteria (pfam14436), COG3177 (Fic family protein ), RVT-GII, GIIM (pfam08388)