myRT

myRT report for GCA_000424725.1_ASM42472v1

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Seq: KE384231.1 Salinispora arenicola CNH963 genomic scaffold H278DRAFT_scaffold00010.10, whole genome shotgun sequence (161178 bp)
Overview 1 RT 1: 117-5197 bp Neighborhood of RT #1 [117, 5197] RVT-GII GIIM INT_ICEBs1_C_like Feature: gene Location: 117-1637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1 1 40 bp Feature: domain Description: GIIM Note: maturase Location: 1206-1437 bp Feature: domain Description: GIIM Note: maturase Location: 1 206-1 437 bp Feature: gene Location: 2615-3034 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2624-2927 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 2624-2927 bp Feature: gene Location: 3383-5197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)

Seq: AUKL01000049.1 Salinispora arenicola CNH963 H278DRAFT_scaffold00042.42_C, whole genome shotgun sequence (37419 bp)
Overview 1 RT 1: 11869-18949 bp Neighborhood of RT #1 [11869, 18972] HTH_MerR-trunc PLDc_2 Nudix_Hydrolase_17 RVT-UG7 INT_ICEBs1_C_like Amino_oxidase Feature: gene Location: 11869-12627 bp Feature: domain Description: HTH_MerR-trunc Location: 11917-11986 bp Feature: domain Description: HTH_MerR-trunc Location: 11917-11986 bp Feature: domain Description: PLDc_2 Location: 12154-12328 bp Feature: domain Description: PLDc_2 Location: 12 154-12 32 8 bp Feature: gene Location: 12632-13102 bp Feature: domain Description: Nudix_Hydrolase_17 Location: 12686-13067 bp Feature: domain Description: Nudix_Hydrolase_17 Location: 12 686-13067 bp Feature: gene Location: 13808-15451 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 14240-14663 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 142 40-14663 bp Feature: gene Location: 16161-17495 bp Feature: domain Description: INT_ICEBs1_C_like Location: 16878-17400 bp Feature: domain Description: INT_ICEBs1_C_like Location: 16878-17400 bp Feature: gene Location: 17731-18972 bp Feature: domain Description: Amino_oxidase Location: 17773-18949 bp Feature: domain Description: Amino_oxidase Location: 17773-18949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MerR-trunc (cd04762), PLDc_2 (pfam13091), Nudix_Hydrolase_17 (cd04676), RVT-UG7, INT_ICEBs1_C_like (cd01189), Amino_oxidase (pfam01593)

Seq: AUKL01000069.1 Salinispora arenicola CNH963 H278DRAFT_scaffold00061.61_C, whole genome shotgun sequence (14855 bp)
Overview 1 RT 1: 10680-14539 bp Neighborhood of RT #1 [10680, 14739] DDE_Tnp_Tn3 RVT-GII GIIM Feature: gene Location: 10680-11093 bp Feature: gene Location: 12058-12444 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12061-12439 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12061-1243 9 bp Feature: gene Location: 13219-14739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13549-14242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 549-14242 bp Feature: domain Description: GIIM Note: maturase Location: 14308-14539 bp Feature: domain Description: GIIM Note: maturase Location: 143 08-1453 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388)