myRT

myRT report for GCA_000424945.1_ASM42494v1

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Seq: AUKV01000067.1 Streptomyces sp. 142MFCol3.1 H305DRAFT_scaffold00066.66_C, whole genome shotgun sequence (13085 bp)
Overview 1 RT 1: 503-6866 bp Neighborhood of RT #1 [503, 6866] FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP DDE_5 DDE_5 RVT_N RVT-GII GIIM HNH Feature: gene Location: 503-2011 bp Feature: domain Description: FG-GAP Location: 725-818 bp Feature: domain Description: FG-GAP Location: 725-81 8 bp Feature: domain Description: FG-GAP Location: 935-986 bp Feature: domain Description: FG-GAP Location: 935-986 bp Feature: domain Description: FG-GAP Location: 1055-1106 bp Feature: domain Description: FG-GAP Location: 1 055-1 1 06 bp Feature: domain Description: FG-GAP Location: 1214-1262 bp Feature: domain Description: FG-GAP Location: 1 21 4-1 262 bp Feature: domain Description: FG-GAP Location: 1583-1694 bp Feature: domain Description: FG-GAP Location: 1 583-1 694 bp Feature: domain Description: FG-GAP Location: 1793-1904 bp Feature: domain Description: FG-GAP Location: 1 793-1 904 bp Feature: gene Location: 2475-2945 bp Feature: domain Description: DDE_5 Location: 2553-2751 bp Feature: domain Description: DDE_5 Location: 2553-2751 bp Feature: domain Description: DDE_5 Location: 2754-2892 bp Feature: domain Description: DDE_5 Location: 2754-2892 bp Feature: gene Location: 3135-4898 bp Feature: RT Description: RVT_N Location: 3207-3450 bp Feature: RT Description: RVT_N Location: 3207-3450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3504-4161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3504-41 61 bp Feature: domain Description: GIIM Note: maturase Location: 4218-4449 bp Feature: domain Description: GIIM Note: maturase Location: 421 8-4449 bp Feature: domain Description: HNH Note: nucleases Location: 4773-4875 bp Feature: domain Description: HNH Note: nucleases Location: 4773-4875 bp Feature: gene Location: 5644-6243 bp Feature: gene Location: 6354-6866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), FG-GAP (pfam01839)