myRT

myRT report for GCA_000425385.1_ASM42538v1

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Seq: AUDI01000016.1 Pseudoduganella violaceinigra DSM 15887 H597DRAFT_scaffold00011.11_C, whole genome shotgun sequence (262426 bp)
Overview 1 RT 1: 54226-61122 bp Neighborhood of RT #1 [54226, 61122] uvrD DMT_YdcZ DMT_YdcZ RVT-Retrons Cellulase Feature: gene Location: 54226-56535 bp Feature: domain Description: uvrD Location: 54238-56527 bp Feature: domain Description: uvrD Location: 54238-56527 bp Feature: gene Location: 56691-57614 bp Feature: domain Description: DMT_YdcZ Location: 56712-57114 bp Feature: domain Description: DMT_YdcZ Location: 5671 2-571 1 4 bp Feature: domain Description: DMT_YdcZ Location: 57174-57597 bp Feature: domain Description: DMT_YdcZ Location: 571 74-57597 bp Feature: gene Location: 57858-59240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58371-59007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58371 -59007 bp Feature: gene Location: 59254-60462 bp Feature: domain Description: Cellulase Location: 59539-60355 bp Feature: domain Description: Cellulase Location: 59539-60355 bp Feature: gene Location: 60469-61122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT uvrD (TIGR01075), DMT_YdcZ (pfam04657), RVT-Retrons, Cellulase (pfam00150)

Seq: AUDI01000031.1 Pseudoduganella violaceinigra DSM 15887 H597DRAFT_scaffold00024.24_C, whole genome shotgun sequence (26707 bp)
Overview 1 RT 1: 552-8235 bp Neighborhood of RT #1 [552, 9263] M4_TLP RVT-Retrons SWIM WGR_DNA_ligase HEAT_2 HEAT_2 Feature: gene Location: 552-2282 bp Feature: domain Description: M4_TLP Location: 1404-2262 bp Feature: domain Description: M4_TLP Location: 1404-2 2 62 bp Feature: gene Location: 2340-4235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2901-3510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 901-3510 bp Feature: gene Location: 4543-6120 bp Feature: domain Description: SWIM Location: 5980-6094 bp Feature: domain Description: SWIM Location: 5980-6094 bp Feature: gene Location: 6180-9263 bp Feature: domain Description: WGR_DNA_ligase Location: 6240-6423 bp Feature: domain Description: WGR_DNA_ligase Location: 62 40-642 3 bp Feature: domain Description: HEAT_2 Location: 6510-6771 bp Feature: domain Description: HEAT_2 Location: 6510-6771 bp Feature: domain Description: HEAT_2 Location: 7947-8235 bp Feature: domain Description: HEAT_2 Location: 7947-82 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M4_TLP (cd09597), RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)