myRT

myRT report for GCA_000425625.1_ASM42562v1

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Seq: KE384413.1 Pseudomonas azotifigens DSM 17556 genomic scaffold H610DRAFT_scaffold00010.10, whole genome shotgun sequence (172503 bp)
Overview 1 RT 1: 15620-18951 bp Neighborhood of RT #1 [15620, 18965] DUF86 RVT-GII ComEA FliT Feature: gene Location: 15620-15958 bp Feature: gene Location: 16021-16437 bp Feature: domain Description: DUF86 Location: 16063-16417 bp Feature: domain Description: DUF86 Location: 1 6063-1 641 7 bp Feature: gene Location: 16977-17585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17169-17571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 69-1 7571 bp Feature: gene Location: 18200-18511 bp Feature: domain Description: ComEA Location: 18263-18503 bp Feature: domain Description: ComEA Location: 1 8263-1 8503 bp Feature: gene Location: 18669-18965 bp Feature: domain Description: FliT Location: 18717-18951 bp Feature: domain Description: FliT Location: 1 871 7-1 8951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF86 (pfam01934), RVT-GII, ComEA (COG1555), FliT (pfam05400)

Seq: KE384422.1 Pseudomonas azotifigens DSM 17556 genomic scaffold H610DRAFT_scaffold00026.26, whole genome shotgun sequence (70872 bp)
Overview 1 RT 1: 44941-54014 bp Neighborhood of RT #1 [44941, 55819] PRK09692 RVT-UG5 nitrilase SSL2 Feature: gene Location: 44941-45264 bp Feature: gene Location: 45974-47230 bp Feature: domain Description: PRK09692 Location: 45980-47198 bp Feature: domain Description: PRK09692 Location: 45980-47198 bp Feature: gene Location: 47430-50450 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 47916-48411 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 47916-48411 bp Feature: domain Description: nitrilase Location: 49659-50349 bp Feature: domain Description: nitrilase Location: 49659-50349 bp Feature: gene Location: 50591-52705 bp Feature: gene Location: 52880-55819 bp Feature: domain Description: SSL2 Location: 52913-54014 bp Feature: domain Description: SSL2 Location: 52 913-54014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), SSL2 (COG1061)