myRT

myRT report for GCA_000426785.1_ASM42678v1

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Seq: AUGA01000028.1 Bradyrhizobium sp. th.b2 K359DRAFT_scaffold00027.27_C, whole genome shotgun sequence (124815 bp)
Overview 1 RT 1: 49979-54741 bp Neighborhood of RT #1 [49979, 54800] ArdC RVT-GII Intron_maturas2 YncB Feature: gene Location: 49979-50926 bp Feature: domain Description: ArdC Location: 50006-50894 bp Feature: domain Description: ArdC Location: 50006-50894 bp Feature: gene Location: 51398-51526 bp Feature: gene Location: 51959-53854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52226-53057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52226-53057 bp Feature: domain Description: Intron_maturas2 Location: 53168-53450 bp Feature: domain Description: Intron_maturas2 Location: 531 68-53450 bp Feature: gene Location: 53975-54166 bp Feature: gene Location: 54276-54800 bp Feature: domain Description: YncB Location: 54348-54741 bp Feature: domain Description: YncB Location: 54348-54741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, Intron_maturas2 (pfam01348), YncB (COG1525)

Seq: AUGA01000126.1 Bradyrhizobium sp. th.b2 K359DRAFT_scaffold00119.119_C, whole genome shotgun sequence (9314 bp)
Overview 1 RT 1: 5312-8332 bp Neighborhood of RT #1 [5312, 8376] HTH_21 RVT-GII GIIM PHA02517 rve_3 Feature: gene Location: 5312-5731 bp Feature: domain Description: HTH_21 Location: 5414-5582 bp Feature: domain Description: HTH_2 1 Location: 5414-5582 bp Feature: gene Location: 5957-6205 bp Feature: gene Location: 6333-7844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6591-7323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6591-732 3 bp Feature: domain Description: GIIM Note: maturase Location: 7398-7596 bp Feature: domain Description: GIIM Note: maturase Location: 7398-7596 bp Feature: gene Location: 7924-8169 bp Feature: domain Description: PHA02517 Location: 7933-8164 bp Feature: domain Description: PHA02 517 Location: 7933-8164 bp Feature: gene Location: 8179-8376 bp Feature: domain Description: rve_3 Location: 8185-8332 bp Feature: domain Description: rve_3 Location: 8185-8332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), rve_3 (pfam13683)

Seq: AUGA01000197.1 Bradyrhizobium sp. th.b2 K359DRAFT_scaffold00189.189_C, whole genome shotgun sequence (2831 bp)
Overview 1 RT 1: 84-1727 bp Neighborhood of RT #1 [84, 1727] RVT-GII Feature: gene Location: 84-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-948 bp Feature: gene Location: 1094-1339 bp Feature: gene Location: 1416-1727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AUGA01000204.1 Bradyrhizobium sp. th.b2 K359DRAFT_scaffold00196.196_C, whole genome shotgun sequence (2609 bp)
Overview 1 RT 1: 2-2562 bp Neighborhood of RT #1 [2, 2606] RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374 -1031 bp Feature: domain Description: GIIM Note: maturase Location: 1106-1310 bp Feature: domain Description: GIIM Note: maturase Location: 1106-1310 bp Feature: gene Location: 2127-2606 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2133-2427 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2133-24 27 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2448-2562 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 24 4 8-2562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388)