myRT

myRT report for GCA_000426805.1_ASM42680v1

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Seq: AUGB01000006.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00005.5_C, whole genome shotgun sequence (297249 bp)
Overview 1 RT 1: 117236-123512 bp Neighborhood of RT #1 [117236, 123535] CRISPR_Cas2 RVT-CRISPR Cas1_I-II-III Cmr6 Cas_Cmr5 Feature: gene Location: 117236-118105 bp Feature: gene Location: 118759-119037 bp Feature: domain Description: CRISPR_Cas2 Location: 118768-118972 bp Feature: domain Description: CRISPR_Cas2 Location: 1 1 8768-1 1 8972 bp Feature: gene Location: 119041-121947 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 120205-120817 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 20205-1 2081 7 bp Feature: domain Description: Cas1_I-II-III Location: 121006-121912 bp Feature: domain Description: Cas1 _I-II-III Location: 1 21 006-1 21 91 2 bp Feature: gene Location: 121947-123134 bp Feature: domain Description: Cmr6 Location: 122088-122814 bp Feature: domain Description: Cmr6 Location: 1 22088-1 2281 4 bp Feature: gene Location: 123131-123535 bp Feature: domain Description: Cas_Cmr5 Location: 123161-123512 bp Feature: domain Description: Cas_Cmr5 Location: 1 231 61 -1 2351 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas2 (pfam09827), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6 (COG1604), Cas_Cmr5 (pfam09701)

Seq: KE384578.1 Teredinibacter turnerae T8513 genomic scaffold K382DRAFT_scaffold00013.13, whole genome shotgun sequence (164045 bp)
Overview 1 RT 1: 43596-49018 bp Neighborhood of RT #1 [43596, 49404] CRISPR_Cas6 RVT-CRISPR Cmr1 Cas10_III Feature: gene Location: 43596-45719 bp Feature: domain Description: CRISPR_Cas6 Location: 44262-44556 bp Feature: domain Description: CRISPR_Cas6 Location: 442 62 -44556 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 44889-45438 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 44889-45438 bp Feature: gene Location: 46169-47593 bp Feature: domain Description: Cmr1 Location: 46259-47309 bp Feature: domain Description: Cmr1 Location: 462 59-47309 bp Feature: gene Location: 47599-49404 bp Feature: domain Description: Cas10_III Location: 47614-49018 bp Feature: domain Description: Cas10_III Location: 47614-49018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cmr1 (COG1367), Cas10_III (cl21742)

Seq: AUGB01000021.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00016.16_C, whole genome shotgun sequence (125295 bp)
Overview 1 RT 1: 121322-124804 bp Neighborhood of RT #1 [121322, 124821] HxlR RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 121322-121522 bp Feature: gene Location: 121767-122000 bp Feature: domain Description: HxlR Location: 121773-121968 bp Feature: domain Description: HxlR Location: 121773 -121968 bp Feature: gene Location: 122607-124094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123030-123723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 03 0-123 723 bp Feature: gene Location: 124108-124284 bp Feature: gene Location: 124465-124821 bp Feature: domain Description: DDE_Tnp_IS66 Location: 124471-124672 bp Feature: domain Description: DDE_Tnp_IS66 Location: 124471-124672 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 124690-124804 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 124690-124804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: AUGB01000058.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00053.53_C, whole genome shotgun sequence (3000 bp)
Overview 1 RT 1: 566-2701 bp Neighborhood of RT #1 [566, 2802] RVT-GII GIIM Feature: gene Location: 566-823 bp Feature: gene Location: 798-968 bp Feature: gene Location: 1483-2802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1738-2404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1738-24 04 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2701 bp Feature: domain Description: GIIM Note: maturase Location: 2500-2701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AUGB01000064.1 Teredinibacter turnerae T8513 K382DRAFT_scaffold00059.59_C, whole genome shotgun sequence (1958 bp)
Overview 1 RT 1: 555-1773 bp Neighborhood of RT #1 [555, 1874] RVT-GII GIIM Feature: gene Location: 555-1874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1476 bp Feature: domain Description: GIIM Note: maturase Location: 1575-1773 bp Feature: domain Description: GIIM Note: maturase Location: 15 75 -1773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)