myRT

myRT report for GCA_000427525.1_ASM42752v1

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Seq: ATYE01000002.1 Asinibacterium sp. OR43 SedOR43DRAFT_scaffold_1.2_C, whole genome shotgun sequence (562488 bp)
Overview 1 RT 1: 53258-58434 bp Neighborhood of RT #1 [53258, 58451] DDE_Tnp_1 RVT-GII GIIM Haem_oxygenas_2 Cupin_2 fabD Feature: gene Location: 53258-54466 bp Feature: domain Description: DDE_Tnp_1 Location: 53654-54254 bp Feature: domain Description: DDE_Tnp_1 Location: 53654-54254 bp Feature: gene Location: 54621-54776 bp Feature: gene Location: 55004-56302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55289-55931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55289-55931 bp Feature: domain Description: GIIM Note: maturase Location: 56000-56219 bp Feature: domain Description: GIIM Note: maturase Location: 56000-5621 9 bp Feature: gene Location: 56440-57600 bp Feature: domain Description: Haem_oxygenas_2 Location: 56587-57082 bp Feature: domain Description: Haem_oxygenas_2 Location: 56587-57082 bp Feature: domain Description: Cupin_2 Location: 57316-57514 bp Feature: domain Description: Cupin_2 Location: 5731 6-5751 4 bp Feature: gene Location: 57597-58451 bp Feature: domain Description: fabD Location: 57600-58434 bp Feature: domain Description: fabD Location: 57600-58434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), Haem_oxygenas_2 (pfam14518), Cupin_2 (pfam07883), fabD (TIGR00128)

Seq: ATYE01000006.1 Asinibacterium sp. OR43 SedOR43DRAFT_scaffold_4.5_C, whole genome shotgun sequence (371244 bp)
Overview 1 RT 1: 26514-31536 bp Neighborhood of RT #1 [26514, 31553] COG3177 RVT-UG2 WYL WYL Feature: gene Location: 26514-26852 bp Feature: gene Location: 27014-28333 bp Feature: domain Description: COG3177 Location: 27389-28283 bp Feature: domain Description: COG3177 Location: 2 7389-2 82 83 bp Feature: gene Location: 28404-30056 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 28701-29658 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 8701-2 9658 bp Feature: gene Location: 30117-30350 bp Feature: gene Location: 30444-31553 bp Feature: domain Description: WYL Location: 31110-31290 bp Feature: domain Description: WYL Location: 31110-312 90 bp Feature: domain Description: WYL Location: 31317-31536 bp Feature: domain Description: WYL Location: 31317-31536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT-UG2, WYL (pfam13280)