myRT

myRT report for GCA_000428025.1_ASM42802v1

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Seq: ATZD01000003.1 Sinorhizobium meliloti Mlalz-1 A3CADRAFT_scaffold_2.3_C, whole genome shotgun sequence (299484 bp)
Overview 1 RT 1: 296398-299214 bp Neighborhood of RT #1 [296398, 299363] fabG DUF3018 RVT-GII GIIM Feature: gene Location: 296398-297180 bp Feature: domain Description: fabG Location: 296416-297166 bp Feature: domain Description: fabG Location: 29641 6-2971 66 bp Feature: gene Location: 297363-297503 bp Feature: domain Description: DUF3018 Location: 297369-297492 bp Feature: domain Description: DUF301 8 Location: 297369-297492 bp Feature: gene Location: 298002-299363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298329-298944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298329-298944 bp Feature: domain Description: GIIM Note: maturase Location: 298998-299214 bp Feature: domain Description: GIIM Note: maturase Location: 298998-29921 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: ATZD01000028.1 Sinorhizobium meliloti Mlalz-1 A3CADRAFT_scaffold_27.28_C, whole genome shotgun sequence (92811 bp)
Overview 1 RT 1: 122-4454 bp Neighborhood of RT #1 [122, 4465] RVT-GII GIIM PRK09356 hutH Feature: gene Location: 122-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1064 bp Feature: domain Description: GIIM Note: maturase Location: 1118-1334 bp Feature: domain Description: GIIM Note: maturase Location: 1118-1334 bp Feature: gene Location: 1563-2933 bp Feature: domain Description: PRK09356 Location: 1722-2925 bp Feature: domain Description: PRK09356 Location: 172 2 -2 92 5 bp Feature: gene Location: 2930-4465 bp Feature: domain Description: hutH Location: 2939-4454 bp Feature: domain Description: hutH Location: 2 939-4454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09356 (imidazolonepropionase; Validated), hutH (TIGR01225)

Seq: ATZD01000075.1 Sinorhizobium meliloti Mlalz-1 A3CADRAFT_scaffold_73.74_C, whole genome shotgun sequence (11691 bp)
Overview 1 RT 1: 2742-5825 bp Neighborhood of RT #1 [2742, 6178] GIIM RVT-GII COG3415 Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 2742-2948 bp Feature: gene Location: 2973-3542 bp Feature: domain Description: GIIM Note: maturase Location: 3240-3456 bp Feature: domain Description: GIIM Note: maturase Location: 3 240-3 456 bp Feature: gene Location: 3478-4224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3694-4210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 694-4210 bp Feature: gene Location: 4707-5135 bp Feature: domain Description: COG3415 Location: 4710-5022 bp Feature: domain Description: COG3 415 Location: 4710-5022 bp Feature: gene Location: 5348-6178 bp Feature: domain Description: Zn_Tnp_IS91 Location: 5354-5552 bp Feature: domain Description: Zn_Tnp_IS91 Location: 53 54-5552 bp Feature: domain Description: Y2_Tnp Location: 5633-5825 bp Feature: domain Description: Y2_Tnp Location: 563 3 -5825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, COG3415 (Transposase ), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: ATZD01000010.1 Sinorhizobium meliloti Mlalz-1 A3CADRAFT_scaffold_9.10_C, whole genome shotgun sequence (190752 bp)
Overview 1 RT 1: 159113-165427 bp Neighborhood of RT #1 [159113, 165427] PinE RVT-UG12 SLATT_5 Feature: gene Location: 159113-159373 bp Feature: gene Location: 160708-161325 bp Feature: domain Description: PinE Location: 160720-161269 bp Feature: domain Description: PinE Location: 160720-161269 bp Feature: gene Location: 161688-163232 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 161976-162378 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 161976-162378 bp Feature: gene Location: 163242-163910 bp Feature: domain Description: SLATT_5 Location: 163335-163872 bp Feature: domain Description: SLATT_5 Location: 163335-163872 bp Feature: gene Location: 164234-165427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG12, SLATT_5 (pfam18160)