myRT

myRT report for GCA_000428125.1_ASM42812v1

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Seq: ATZI01000004.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00003.3_C, whole genome shotgun sequence (203522 bp)
Overview 1 RT 1: 13950-17310 bp Neighborhood of RT #1 [13950, 17310] RVT-UG27 Feature: gene Location: 13950-14927 bp Feature: gene Location: 14957-15292 bp Feature: gene Location: 15350-16624 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 15548-16184 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 5548-1 61 84 bp Feature: gene Location: 16667-16948 bp Feature: gene Location: 17101-17310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: ATZI01000005.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00004.4_C, whole genome shotgun sequence (192111 bp)
Overview 1 RT 1: 444-4901 bp Neighborhood of RT #1 [444, 4918] COG3464 HTH_38 COG3464 RVT-GII GIIM SUA5 purE Feature: gene Location: 444-1310 bp Feature: domain Description: COG3464 Location: 579-1209 bp Feature: domain Description: COG3464 Location: 579-12 09 bp Feature: gene Location: 1388-2164 bp Feature: domain Description: HTH_38 Location: 1397-1478 bp Feature: domain Description: HTH_38 Location: 1397-1478 bp Feature: domain Description: COG3464 Location: 1871-2150 bp Feature: domain Description: COG3464 Location: 1871-2 150 bp Feature: gene Location: 2177-3214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2210-2765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 10-2 765 bp Feature: domain Description: GIIM Note: maturase Location: 2837-3062 bp Feature: domain Description: GIIM Note: maturase Location: 2 837-3062 bp Feature: gene Location: 3490-4530 bp Feature: domain Description: SUA5 Location: 3577-4159 bp Feature: domain Description: SUA5 Location: 3577-4159 bp Feature: gene Location: 4442-4918 bp Feature: domain Description: purE Location: 4454-4901 bp Feature: domain Description: purE Location: 4454-4901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), HTH_38 (pfam13936), RVT-GII, GIIM (pfam08388), SUA5 (pfam03481), purE (TIGR01162)

Seq: ATZI01000006.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 strain DSM 19988 C511DRAFT_scaffold00005.5_C, whole genome shotgun sequence (178596 bp)
Overview 1 RT 1: 53987-61241 bp Neighborhood of RT #1 [53987, 61241] PRK09426 mmCoA_mut_beta RT_like_1 RVT-UG28 Feature: gene Location: 53987-56131 bp Feature: domain Description: PRK09426 Location: 53999-56126 bp Feature: domain Description: PRK09426 Location: 53 999-56126 bp Feature: gene Location: 56147-58033 bp Feature: domain Description: mmCoA_mut_beta Location: 56168-58025 bp Feature: domain Description: mmCoA_mut_beta Location: 56168-58025 bp Feature: gene Location: 58968-60467 bp Feature: domain Description: RT_like_1 Location: 58986-59208 bp Feature: domain Description: RT_like_1 Location: 58986-59208 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 59247-59886 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 59247-59886 bp Feature: gene Location: 60627-61088 bp Feature: gene Location: 61095-61241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09426 (methylmalonyl-CoA mutase; Reviewed), mmCoA_mut_beta (TIGR00642), RT_like_1 (cd01709), RVT-UG28