myRT

myRT report for GCA_000428565.1_ASM42856v1

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Seq: KE386763.1 Parabacteroides gordonii DSM 23371 genomic scaffold F592DRAFT_scaffold00001.1, whole genome shotgun sequence (706765 bp)
Overview 1 RT 1: 99443-102509 bp Neighborhood of RT #1 [99443, 102509] DUF1566 RVT-DGRs Avd_like Feature: gene Location: 99443-99610 bp Feature: gene Location: 100052-100285 bp Feature: domain Description: DUF1566 Location: 100088-100253 bp Feature: domain Description: DUF1 566 Location: 1 00088-1 00253 bp Feature: gene Location: 100289-101659 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100478-101285 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 00478-1 01 285 bp Feature: gene Location: 101643-101987 bp Feature: domain Description: Avd_like Location: 101673-101976 bp Feature: domain Description: Avd_like Location: 1 01 673-1 01 976 bp Feature: gene Location: 102000-102509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: KE386767.1 Parabacteroides gordonii DSM 23371 genomic scaffold F592DRAFT_scaffold00015.15, whole genome shotgun sequence (161331 bp)
Overview 1 RT 1: 5633-14601 bp Neighborhood of RT #1 [5633, 15206] KAP_NTPase KAP_NTPase RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 5633-7522 bp Feature: domain Description: KAP_NTPase Location: 5681-5768 bp Feature: domain Description: KAP_NTPase Location: 5681-5768 bp Feature: domain Description: KAP_NTPase Location: 6041-6317 bp Feature: domain Description: KAP_NTPase Location: 6041-6317 bp Feature: gene Location: 7764-8891 bp Feature: gene Location: 8845-10512 bp Feature: RT Description: RVT_N Location: 8899-9142 bp Feature: RT Description: RVT_N Location: 8899-9142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9187-9835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9187-9835 bp Feature: domain Description: GIIM Note: maturase Location: 9889-10120 bp Feature: domain Description: GIIM Note: maturase Location: 9889-1012 0 bp Feature: gene Location: 10527-10808 bp Feature: gene Location: 11169-15206 bp Feature: domain Description: N6_Mtase Location: 11661-12075 bp Feature: domain Description: N6_Mtase Location: 11661-12 075 bp Feature: domain Description: COG4646 Location: 12858-14601 bp Feature: domain Description: COG4646 Location: 12 858-14601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)