myRT

myRT report for GCA_000428585.1_ASM42858v1

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Seq: AUAF01000010.1 Zooshikella ganghwensis DSM 15267 F607DRAFT_scaffold00010.10_C, whole genome shotgun sequence (84884 bp)
Overview 1 RT 1: 73681-84432 bp Neighborhood of RT #1 [73681, 84449] WD40 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 WGR_MMR_like RVT-Retrons YgiN MarR Feature: gene Location: 73681-80202 bp Feature: domain Description: WD40 Location: 74092-74572 bp Feature: domain Description: WD40 Location: 74092-74572 bp Feature: domain Description: HEAT_2 Location: 74647-74800 bp Feature: domain Description: HEAT_2 Location: 74647-74800 bp Feature: domain Description: HEAT Location: 74809-74890 bp Feature: domain Description: HEAT Location: 74809-74890 bp Feature: domain Description: HEAT_2 Location: 75013-75259 bp Feature: domain Description: HEAT_2 Location: 7501 3-75259 bp Feature: domain Description: HEAT_2 Location: 75469-75679 bp Feature: domain Description: HEAT_2 Location: 75469-75679 bp Feature: domain Description: HEAT_2 Location: 76006-76255 bp Feature: domain Description: HEAT_2 Location: 76006-76255 bp Feature: domain Description: HEAT_2 Location: 76441-76618 bp Feature: domain Description: HEAT_2 Location: 76441 -7661 8 bp Feature: domain Description: HEAT_2 Location: 78541-78796 bp Feature: domain Description: HEAT_2 Location: 78541 -78796 bp Feature: domain Description: HEAT_2 Location: 78889-79081 bp Feature: domain Description: HEAT_2 Location: 78889-79081 bp Feature: gene Location: 80195-82057 bp Feature: domain Description: WGR_MMR_like Location: 81890-82040 bp Feature: domain Description: WGR_MMR_like Location: 81 890-82040 bp Feature: gene Location: 82066-83352 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82507-83113 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82507-831 1 3 bp Feature: gene Location: 83710-83997 bp Feature: domain Description: YgiN Location: 83725-83986 bp Feature: domain Description: YgiN Location: 83725-83986 bp Feature: gene Location: 84006-84449 bp Feature: domain Description: MarR Location: 84135-84432 bp Feature: domain Description: MarR Location: 841 35-84432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), HEAT (sd00044), WGR_MMR_like (cd07996), RVT-Retrons, YgiN (COG1359), MarR (pfam01047)

Seq: AUAF01000026.1 Zooshikella ganghwensis DSM 15267 F607DRAFT_scaffold00026.26_C, whole genome shotgun sequence (48191 bp)
Overview 1 RT 1: 31786-35844 bp Neighborhood of RT #1 [31786, 35855] Lipase_3 RVT-UG4 Beta_helix Beta_helix Feature: gene Location: 31786-32502 bp Feature: domain Description: Lipase_3 Location: 32023-32311 bp Feature: domain Description: Lipase_3 Location: 32 02 3-32 311 bp Feature: gene Location: 32593-32925 bp Feature: gene Location: 32961-33503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 32967-33279 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 32 967-332 79 bp Feature: gene Location: 33591-34436 bp Feature: gene Location: 34869-35855 bp Feature: domain Description: Beta_helix Location: 35142-35631 bp Feature: domain Description: Beta_helix Location: 35142 -35631 bp Feature: domain Description: Beta_helix Location: 35640-35844 bp Feature: domain Description: Beta_helix Location: 35640-35844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipase_3 (pfam01764), RVT-UG4, Beta_helix (pfam13229)

Seq: AUAF01000324.1 Zooshikella ganghwensis DSM 15267 F607DRAFT_scaffold00325.325_C, whole genome shotgun sequence (1952 bp)
Overview 1 RT 1: 167-1088 bp Neighborhood of RT #1 [167, 1717] RVT-UG14 Feature: gene Location: 167-1717 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 605-1088 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 605-1088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14