myRT

myRT report for GCA_000429545.1_ASM42954v1

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Seq: AUCB01000018.1 Arenibacter certesii DSM 19833 G466DRAFT_scaffold00017.17_C, whole genome shotgun sequence (104114 bp)
Overview 1 RT 1: 5270-9669 bp Neighborhood of RT #1 [5270, 9669] Lipocalin_4 group_II_RT_mat RVT-UG19 Feature: gene Location: 5270-5434 bp Feature: gene Location: 5712-6113 bp Feature: domain Description: Lipocalin_4 Location: 5814-6057 bp Feature: domain Description: Lipocalin_4 Location: 581 4-6057 bp Feature: gene Location: 6588-8258 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6630-6891 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6630-6891 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 6993-7467 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 6993-7467 bp Feature: gene Location: 8258-8902 bp Feature: gene Location: 9388-9669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipocalin_4 (pfam13648), group_II_RT_mat (TIGR04416), RVT-UG19

Seq: AUCB01000027.1 Arenibacter certesii DSM 19833 G466DRAFT_scaffold00025.25_C, whole genome shotgun sequence (79086 bp)
Overview 1 RT 1: 68030-74222 bp Neighborhood of RT #1 [68030, 74248] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like COG4928 RVT-GII GIIM DinB_2 Feature: gene Location: 68030-69184 bp Feature: domain Description: Arm-DNA-bind_5 Location: 68039-68255 bp Feature: domain Description: Arm-DNA-bind_5 Location: 68039-682 55 bp Feature: domain Description: Phage_int_SAM_5 Location: 68315-68603 bp Feature: domain Description: Phage_int_SAM_5 Location: 68315-68603 bp Feature: domain Description: INTN1_C_like Location: 68654-69134 bp Feature: domain Description: INTN1_C_like Location: 68654-69134 bp Feature: gene Location: 69427-71565 bp Feature: domain Description: COG4928 Location: 69460-70828 bp Feature: domain Description: COG492 8 Location: 69460-7082 8 bp Feature: gene Location: 71670-72938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71871-72486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71871-72 486 bp Feature: domain Description: GIIM Note: maturase Location: 72558-72771 bp Feature: domain Description: GIIM Note: maturase Location: 72 558-72 771 bp Feature: gene Location: 73456-73680 bp Feature: gene Location: 73727-74248 bp Feature: domain Description: DinB_2 Location: 73772-74222 bp Feature: domain Description: DinB_2 Location: 73772 -742 2 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), COG4928 (Predicted P-loop ATPase, KAP-like ), RVT-GII, GIIM (pfam08388), DinB_2 (pfam12867)