myRT

myRT report for GCA_000430625.1_ASM43062v1

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Seq: KE387173.1 Aneurinibacillus terranovensis DSM 18919 genomic scaffold H525DRAFT_scaffold00005.5, whole genome shotgun sequence (200011 bp)
Overview 1 RT 1: 127616-135349 bp Neighborhood of RT #1 [127616, 135384] ALDH_AldH-CAJ73105 DUF772 DDE_Tnp_1 RVT-GII GIIM Mqo Feature: gene Location: 127616-129097 bp Feature: domain Description: ALDH_AldH-CAJ73105 Location: 127634-129062 bp Feature: domain Description: ALDH_AldH-CAJ731 05 Location: 1 27634-1 29062 bp Feature: gene Location: 129349-130473 bp Feature: domain Description: DUF772 Location: 129367-129565 bp Feature: domain Description: DUF772 Location: 1 29367-1 29565 bp Feature: domain Description: DDE_Tnp_1 Location: 129775-130060 bp Feature: domain Description: DDE_Tnp_1 Location: 1 29775-1 30060 bp Feature: gene Location: 131226-132557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131535-132174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 535-1 321 74 bp Feature: domain Description: GIIM Note: maturase Location: 132249-132474 bp Feature: domain Description: GIIM Note: maturase Location: 1 32249-1 32474 bp Feature: gene Location: 133193-133480 bp Feature: gene Location: 133873-135384 bp Feature: domain Description: Mqo Location: 133894-135349 bp Feature: domain Description: Mqo Location: 1 33894-1 35349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_AldH-CAJ73105 (cd07131), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), Mqo (pfam06039)

Seq: AUMJ01000016.1 Aneurinibacillus terranovensis DSM 18919 H525DRAFT_scaffold00007.7_C, whole genome shotgun sequence (127377 bp)
Overview 1 RT 1: 92364-98648 bp Neighborhood of RT #1 [92364, 98653] STAS_RsbR_RsbS_like SinI RHH_4 SAP RHH_4 RVT-GII GIIM rpsR PRK07275 RVT-GII group_II_RT_mat HNHc PRK06751 rpsF Feature: gene Location: 92364-93185 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 92841-93165 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 92 841-93165 bp Feature: gene Location: 93443-93934 bp Feature: domain Description: SinI Location: 93587-93626 bp Feature: domain Description: SinI Location: 93587-9362 6 bp Feature: domain Description: RHH_4 Location: 93641-93728 bp Feature: domain Description: RHH_4 Location: 93641-9372 8 bp Feature: domain Description: SAP Location: 93785-93821 bp Feature: domain Description: SAP Location: 93785-9382 1 bp Feature: domain Description: RHH_4 Location: 93830-93902 bp Feature: domain Description: RHH_4 Location: 93830-93902 bp Feature: gene Location: 94261-94815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94309-94573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94309-94573 bp Feature: domain Description: GIIM Note: maturase Location: 94621-94813 bp Feature: domain Description: GIIM Note: maturase Location: 9462 1-94813 bp Feature: gene Location: 94840-94974 bp Feature: gene Location: 95089-95322 bp Feature: domain Description: rpsR Location: 95095-95317 bp Feature: domain Description: rpsR Location: 95095-95317 bp Feature: gene Location: 95357-95596 bp Feature: domain Description: PRK07275 Location: 95363-95594 bp Feature: domain Description: PRK072 75 Location: 95363-95594 bp Feature: gene Location: 95766-97592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96033-96858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96033-96858 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 97071-97197 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 97071-97197 bp Feature: domain Description: HNHc Note: nucleases Location: 97419-97566 bp Feature: domain Description: HNHc Note: nucleases Location: 97419-97566 bp Feature: gene Location: 98117-98359 bp Feature: domain Description: PRK06751 Location: 98138-98336 bp Feature: domain Description: PRK06751 Location: 98138-98336 bp Feature: gene Location: 98363-98653 bp Feature: domain Description: rpsF Location: 98366-98648 bp Feature: domain Description: rpsF Location: 98366-98648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STAS_RsbR_RsbS_like (cd07041), SinI (pfam08671), RHH_4 (pfam13467), SAP (smart00513), RVT-GII, GIIM (pfam08388), rpsR (PRK00391), PRK07275 (single-stranded DNA-binding protein; Provisional), group_II_RT_mat (TIGR04416), HNHc (smart00507)
PRK06751 (single-stranded DNA-binding protein; Provisional), rpsF (PRK14074)

Seq: AUMJ01000065.1 Aneurinibacillus terranovensis DSM 18919 H525DRAFT_scaffold00047.47_C, whole genome shotgun sequence (32486 bp)
Overview 1 RT 1: 26432-30507 bp Neighborhood of RT #1 [26432, 30518] Resolvase Recombinase Zn_ribbon_recom RVT-GII PilZ EAL Feature: gene Location: 26432-28069 bp Feature: domain Description: Resolvase Location: 26444-26885 bp Feature: domain Description: Resolvase Location: 26444-26885 bp Feature: domain Description: Recombinase Location: 26957-27299 bp Feature: domain Description: Recombinase Location: 26957-27299 bp Feature: domain Description: Zn_ribbon_recom Location: 27347-27560 bp Feature: domain Description: Zn_ribbon_recom Location: 273 47-27560 bp Feature: gene Location: 28146-28292 bp Feature: gene Location: 28616-28825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28646-28757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28646-28757 bp Feature: gene Location: 29190-29714 bp Feature: domain Description: PilZ Location: 29343-29661 bp Feature: domain Description: PilZ Location: 293 43 -29661 bp Feature: gene Location: 29736-30518 bp Feature: domain Description: EAL Location: 29814-30507 bp Feature: domain Description: EAL Location: 29814-3 0507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, PilZ (pfam07238), EAL (smart00052)

Seq: AUMJ01000099.1 Aneurinibacillus terranovensis DSM 18919 H525DRAFT_scaffold00079.79_C, whole genome shotgun sequence (4507 bp)
Overview 1 RT 1: 107-2326 bp Neighborhood of RT #1 [107, 2326] RVT-GII Feature: gene Location: 107-292 bp Feature: gene Location: 1012-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1210 bp Feature: gene Location: 1750-1881 bp Feature: gene Location: 2099-2326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AUMJ01000109.1 Aneurinibacillus terranovensis DSM 18919 H525DRAFT_scaffold00089.89_C, whole genome shotgun sequence (2240 bp)
Overview 1 RT 1: 7-1868 bp Neighborhood of RT #1 [7, 2116] RVT-GII GIIM Feature: gene Location: 7-183 bp Feature: gene Location: 578-2116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 1-15 95 bp Feature: domain Description: GIIM Note: maturase Location: 1667-1868 bp Feature: domain Description: GIIM Note: maturase Location: 1667-1868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)