myRT

myRT report for GCA_000430845.1_ASM43084v1

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Seq: AUMU01000002.1 Chryseobacterium gregarium DSM 19109 H561DRAFT_scaffold00002.2_C, whole genome shotgun sequence (444683 bp)
Overview 1 RT 1: 129245-137645 bp Neighborhood of RT #1 [129245, 137668] WGR_DNA_ligase RVT-Retrons DDE_Tnp_1_2 DUF4932 Feature: gene Location: 129245-130888 bp Feature: gene Location: 130892-134236 bp Feature: domain Description: WGR_DNA_ligase Location: 130907-131126 bp Feature: domain Description: WGR_DNA_ligase Location: 1 30907-1 31 1 26 bp Feature: gene Location: 134282-135796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134822-135443 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 34822-1 35443 bp Feature: gene Location: 136137-136433 bp Feature: domain Description: DDE_Tnp_1_2 Location: 136266-136407 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 1 36266-1 36407 bp Feature: gene Location: 136637-137668 bp Feature: domain Description: DUF4932 Location: 136700-137645 bp Feature: domain Description: DUF4932 Location: 1 36700-1 37645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, DDE_Tnp_1_2 (pfam13586), DUF4932 (pfam16286)

Seq: KE387264.1 Chryseobacterium gregarium DSM 19109 genomic scaffold H561DRAFT_scaffold00004.4, whole genome shotgun sequence (351267 bp)
Overview 1 RT 1: 235060-241749 bp Neighborhood of RT #1 [235060, 242354] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons Response_reg Feature: gene Location: 235060-235191 bp Feature: gene Location: 235780-237018 bp Feature: domain Description: Arm-DNA-bind_5 Location: 235810-236032 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2 35810-2 36032 bp Feature: domain Description: Phage_int_SAM_5 Location: 236107-236419 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 36107-2 36419 bp Feature: domain Description: INTN1_C_like Location: 236461-236950 bp Feature: domain Description: INTN1_C_like Location: 2 36461-2 36950 bp Feature: gene Location: 237971-240043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 238172-238805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 38172 -2 38805 bp Feature: gene Location: 240043-240672 bp Feature: gene Location: 240678-242354 bp Feature: domain Description: Response_reg Location: 241515-241749 bp Feature: domain Description: Response_reg Location: 2 41515-2 41749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-Retrons, Response_reg (pfam00072)