myRT

myRT report for GCA_000432855.1_MGS822

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Seq: HF990851.1 Firmicutes bacterium CAG:822 genomic scaffold, scf23, whole genome shotgun sequence (58864 bp)
Overview 1 RT 1: 53580-56053 bp Neighborhood of RT #1 [53580, 56115] Avd_like RVT-DGRs rpsF Ssb Feature: gene Location: 53580-53930 bp Feature: gene Location: 53923-54261 bp Ori: CCY46225.1 Feature: domain Description: Avd_like Location: 53941-54244 bp Feature: domain Description: Avd_like Location: 53941 -54244 bp Feature: gene Location: 54242-55243 bp Ori: CCY46226.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54425-55094 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54425-55094 bp Feature: gene Location: 55353-55643 bp Ori: CCY46227.1 Feature: domain Description: rpsF Location: 55356-55641 bp Feature: domain Description: rpsF Location: 55356-55641 bp Feature: gene Location: 55660-56115 bp Ori: CCY46228.1 Feature: domain Description: Ssb Location: 55663-56053 bp Feature: domain Description: Ssb Location: 55663-56053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, rpsF (PRK14074), Ssb (COG0629)

Seq: HF990861.1 Firmicutes bacterium CAG:822 genomic scaffold, scf56, whole genome shotgun sequence (74001 bp)
Overview 1 RT 1: 55772-61069 bp Neighborhood of RT #1 [55772, 61074] ARA1 RVT-Retrons ACD_LpsHSP_like gltX Feature: gene Location: 55772-56728 bp Ori: CCY46513.1 Feature: domain Description: ARA1 Location: 55922-56717 bp Feature: domain Description: ARA1 Location: 5592 2 -56717 bp Feature: gene Location: 56886-57722 bp Feature: gene Location: 57736-58689 bp Ori: CCY46515.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57883-58438 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57883-58438 bp Feature: gene Location: 58950-59330 bp Ori: CCY46516.1 Feature: domain Description: ACD_LpsHSP_like Location: 59019-59289 bp Feature: domain Description: ACD_LpsHSP_like Location: 59019-592 89 bp Feature: gene Location: 59434-61074 bp Ori: CCY46517.1 Feature: domain Description: gltX Location: 59527-61069 bp Feature: domain Description: gltX Location: 5952 7-61069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARA1 (COG0656), RVT-Retrons, ACD_LpsHSP_like (cd06471), gltX (PRK14895)

Seq: HF990845.1 Firmicutes bacterium CAG:822 genomic scaffold, scf21, whole genome shotgun sequence (26591 bp)
Overview 1 RT 1: 21934-25259 bp Neighborhood of RT #1 [21934, 25468] sufB RVT-DGRs Avd_like MutS_I Feature: gene Location: 21934-22272 bp Feature: gene Location: 22285-23598 bp Ori: CCY46112.1 Feature: domain Description: sufB Location: 22297-23584 bp Feature: domain Description: sufB Location: 22297-23 584 bp Feature: gene Location: 23651-24745 bp Ori: CCY46113.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23849-24566 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23 849-24566 bp Feature: gene Location: 24729-25073 bp Ori: CCY46114.1 Feature: domain Description: Avd_like Location: 24750-25059 bp Feature: domain Description: Avd_like Location: 24750-25059 bp Feature: gene Location: 25058-25468 bp Ori: CCY46115.1 Feature: domain Description: MutS_I Location: 25067-25259 bp Feature: domain Description: MutS_I Location: 25067-25259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sufB (TIGR01980), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)

Seq: HF990856.1 Firmicutes bacterium CAG:822 genomic scaffold, scf32, whole genome shotgun sequence (35898 bp)
Overview 1 RT 1: 12187-15610 bp Neighborhood of RT #1 [12187, 15621] YhcC RVT-DGRs Avd_like Feature: gene Location: 12187-13128 bp Ori: CCY46253.1 Feature: domain Description: YhcC Location: 12211-13120 bp Feature: domain Description: YhcC Location: 12211-13120 bp Feature: gene Location: 13109-13498 bp Feature: gene Location: 13549-14652 bp Ori: CCY46255.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13747-14470 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1374 7-14 4 70 bp Feature: gene Location: 14649-15305 bp Feature: gene Location: 15277-15621 bp Ori: CCY46257.1 Feature: domain Description: Avd_like Location: 15298-15610 bp Feature: domain Description: Avd_like Location: 15298-15610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcC (COG1242), RVT-DGRs, Avd_like (cd16376)

Seq: HF990865.1 Firmicutes bacterium CAG:822 genomic scaffold, scf49, whole genome shotgun sequence (122677 bp)
Overview 1 RT 1: 45575-49764 bp 2 RT 2: 112550-115363 bp Neighborhood of RT #1 [45575, 49764] SR_ResInv RVT-UG13 DraG Neighborhood of RT #2 [112550, 115560] RadC RVT-DGRs Avd_like MutS_I Feature: gene Location: 45575-46165 bp Ori: CCY46725.1 Feature: domain Description: SR_ResInv Location: 45590-45995 bp Feature: domain Description: SR_ResInv Location: 45 5 90-45 995 bp Feature: gene Location: 46172-46402 bp Feature: gene Location: 46581-47888 bp Ori: CCY46727.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 46983-47463 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 46983-47463 bp Feature: gene Location: 48105-49079 bp Ori: CCY46728.1 Feature: domain Description: DraG Location: 48150-49068 bp Feature: domain Description: DraG Location: 4815 0-49068 bp Feature: gene Location: 49162-49764 bp Feature: gene Location: 112550-113230 bp Ori: CCY46800.1 Feature: domain Description: RadC Location: 112562-113228 bp Feature: domain Description: RadC Location: 1125 62-113228 bp Feature: gene Location: 113227-113676 bp Feature: gene Location: 113743-114834 bp Ori: CCY46802.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 113947-114667 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 113947-114667 bp Feature: gene Location: 114818-115162 bp Ori: CCY46803.1 Feature: domain Description: Avd_like Location: 114839-115148 bp Feature: domain Description: Avd_like Location: 114839-115 148 bp Feature: gene Location: 115159-115560 bp Ori: CCY46804.1 Feature: domain Description: MutS_I Location: 115177-115363 bp Feature: domain Description: MutS_I Location: 115 177-115 363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), RVT-UG13, DraG (COG1397), RadC (pfam04002), RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624)