myRT

myRT report for GCA_000433255.1_MGS605

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Seq: HF998250.1 Coprobacillus sp. CAG:605 genomic scaffold, scf198, whole genome shotgun sequence (77288 bp)
Overview 1 RT 1: 36059-40538 bp Neighborhood of RT #1 [36059, 40538] PLN02240 spore_IV_B RVT-Retrons CofD_related Feature: gene Location: 36059-37069 bp Ori: CCZ89809.1 Feature: domain Description: PLN02240 Location: 36065-37058 bp Feature: domain Description: PLN02240 Location: 36065-37058 bp Feature: gene Location: 37087-38067 bp Ori: CCZ89810.1 Feature: domain Description: spore_IV_B Location: 37162-38056 bp Feature: domain Description: spore_IV_B Location: 371 62-38056 bp Feature: gene Location: 38343-39296 bp Ori: CCZ89811.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38490-39048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38490-39048 bp Feature: gene Location: 39313-40266 bp Ori: CCZ89812.1 Feature: domain Description: CofD_related Location: 39325-40237 bp Feature: domain Description: CofD_related Location: 39325-40237 bp Feature: gene Location: 40329-40538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02240 (UDP-glucose 4-epimerase), spore_IV_B (TIGR02860), RVT-Retrons, CofD_related (TIGR01826)

Seq: HF998224.1 Coprobacillus sp. CAG:605 genomic scaffold, scf107, whole genome shotgun sequence (1727 bp)
Overview 1 RT 1: 39-1373 bp Neighborhood of RT #1 [39, 1387] RVT-DGRs Avd_like Feature: gene Location: 39-1043 bp Ori: CCZ88880.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 252-858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 52 -858 bp Feature: gene Location: 1028-1387 bp Ori: CCZ88881.1 Feature: domain Description: Avd_like Location: 1058-1373 bp Feature: domain Description: Avd_like Location: 1058-1373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: HF998241.1 Coprobacillus sp. CAG:605 genomic scaffold, scf134, whole genome shotgun sequence (63253 bp)
Overview 1 RT 1: 946-3800 bp Neighborhood of RT #1 [946, 3835] MutS_I Avd_like RVT-DGRs T_den_put_tspse Feature: gene Location: 946-1326 bp Ori: CCZ89585.1 Feature: domain Description: MutS_I Location: 955-1129 bp Feature: domain Description: MutS_I Location: 955-1129 bp Feature: gene Location: 1314-1667 bp Ori: CCZ89586.1 Feature: domain Description: Avd_like Location: 1347-1653 bp Feature: domain Description: Avd_like Location: 13 47-1653 bp Feature: gene Location: 1654-2718 bp Ori: CCZ89587.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1840-2512 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1840-2512 bp Feature: gene Location: 2718-2978 bp Feature: gene Location: 2975-3835 bp Ori: CCZ89589.1 Feature: domain Description: T_den_put_tspse Location: 3011-3800 bp Feature: domain Description: T_den_put_tspse Location: 3 011-3 800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, T_den_put_tspse (TIGR01784)