myRT

myRT report for GCA_000433395.1_MGS224

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Seq: HF996973.1 Clostridium hathewayi CAG:224 genomic scaffold, scf184, whole genome shotgun sequence (82191 bp)
Overview 1 RT 1: 25714-32581 bp Neighborhood of RT #1 [25714, 32610] PurR GDE_N GDE_C RVT-Retrons PRK14806 PRK06545 Feature: gene Location: 25714-26703 bp Ori: CCZ59140.1 Feature: domain Description: PurR Location: 25723-26674 bp Feature: domain Description: PurR Location: 25723-26674 bp Feature: gene Location: 26729-28708 bp Ori: CCZ59142.1 Feature: domain Description: GDE_N Location: 26792-27422 bp Feature: domain Description: GDE_N Location: 26792-27422 bp Feature: domain Description: GDE_C Location: 27581-28673 bp Feature: domain Description: GDE_C Location: 27581 -28673 bp Feature: gene Location: 29088-30101 bp Ori: CCZ59145.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29253-29808 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29253-29808 bp Feature: gene Location: 30216-31493 bp Ori: CCZ59147.1 Feature: domain Description: PRK14806 Location: 30228-31470 bp Feature: domain Description: PRK1 4806 Location: 30228-31 470 bp Feature: gene Location: 31510-32610 bp Ori: CCZ59148.1 Feature: domain Description: PRK06545 Location: 31525-32581 bp Feature: domain Description: PRK06545 Location: 31 525-32581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PurR (COG1609), GDE_N (pfam12439), GDE_C (pfam06202), RVT-Retrons, PRK14806 (bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional), PRK06545 (prephenate dehydrogenase; Validated)

Seq: HF996992.1 Clostridium hathewayi CAG:224 genomic scaffold, scf222, whole genome shotgun sequence (114103 bp)
Overview 1 RT 1: 91659-97546 bp Neighborhood of RT #1 [91659, 97546] LysR RVT-UG24 Feature: gene Location: 91659-91889 bp Feature: gene Location: 91883-92335 bp Ori: CCZ61226.1 Feature: domain Description: LysR Location: 91901-92165 bp Feature: domain Description: LysR Location: 91901-92 165 bp Feature: gene Location: 92630-96124 bp Ori: CCZ61227.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 93170-93626 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 93170-9362 6 bp Feature: gene Location: 96132-96668 bp Feature: gene Location: 96665-97546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-UG24

Seq: HF996883.1 Clostridium hathewayi CAG:224 genomic scaffold, scf27, whole genome shotgun sequence (1517 bp)
Overview 1 RT 1: 124-1240 bp Neighborhood of RT #1 [124, 1404] RVT-GII GIIM Feature: gene Location: 124-1404 bp Ori: CCZ58796.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 4-949 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1009-1240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)