myRT

myRT report for GCA_000434095.1_MGS47

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Seq: FR894295.1 Bacteroides fragilis CAG:47 genomic scaffold, scf121, whole genome shotgun sequence (174355 bp)
Overview 1 RT 1: 104206-113164 bp Neighborhood of RT #1 [104206, 113172] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 104206-106395 bp Ori: CDD38388.1 Feature: domain Description: GlnA3 Location: 104281-106393 bp Feature: domain Description: GlnA3 Location: 1 04281 -1 06393 bp Feature: gene Location: 106635-108854 bp Feature: gene Location: 109061-110173 bp Ori: CDD38391.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109376-109925 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 09376-1 09925 bp Feature: gene Location: 110315-112108 bp Ori: CDD38393.1 Feature: domain Description: rpsA Location: 110393-112001 bp Feature: domain Description: rpsA Location: 1 1 0393-1 1 2001 bp Feature: gene Location: 112258-113172 bp Ori: CDD38394.1 Feature: domain Description: RNase_Z Location: 112273-113164 bp Feature: domain Description: RNase_Z Location: 1 1 2273-1 1 31 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: FR894315.1 Bacteroides fragilis CAG:47 genomic scaffold, scf146, whole genome shotgun sequence (274269 bp)
Overview 1 RT 1: 270201-274079 bp Neighborhood of RT #1 [270201, 274132] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 270201-270611 bp Ori: CDD40700.1 Feature: domain Description: Cas_Cmr5 Location: 270249-270495 bp Feature: domain Description: Cas_Cmr5 Location: 2 702 49-2 70495 bp Feature: gene Location: 270614-271558 bp Ori: CDD40702.1 Feature: domain Description: Cmr6_III-B Location: 270770-271547 bp Feature: domain Description: Cmr6_III-B Location: 2 70770-2 71547 bp Feature: gene Location: 271578-273848 bp Ori: CDD40704.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 271785-272391 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 71785-2 72 391 bp Feature: domain Description: Cas1_I-II-III Location: 272850-273807 bp Feature: domain Description: Cas1_I-II-III Location: 2 72 850-2 73807 bp Feature: gene Location: 273842-274132 bp Ori: CDD40706.1 Feature: domain Description: Cas2_I_II_III Location: 273869-274079 bp Feature: domain Description: Cas2 _I_II_III Location: 2 73869-2 74079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)