myRT

myRT report for GCA_000435995.1_MGS137

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Seq: FR884318.1 Firmicutes bacterium CAG:137 genomic scaffold, scf260, whole genome shotgun sequence (22250 bp)
Overview 1 RT 1: 25-3713 bp Neighborhood of RT #1 [25, 3787] RVT-GII RVT-GII Intron_maturas2 HNHc IME4 Feature: gene Location: 25-504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-499 bp Feature: gene Location: 552-1988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1 251 bp Feature: domain Description: Intron_maturas2 Location: 1323-1638 bp Feature: domain Description: Intron_maturas2 Location: 1 323-1 638 bp Feature: domain Description: HNHc Note: nucleases Location: 1785-1959 bp Feature: domain Description: HNHc Note: nucleases Location: 1 785-1 959 bp Feature: gene Location: 2064-2366 bp Feature: gene Location: 3287-3787 bp Feature: domain Description: IME4 Location: 3296-3713 bp Feature: domain Description: IME4 Location: 3296-371 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), IME4 (COG4725)

Seq: FR884421.1 Firmicutes bacterium CAG:137 genomic scaffold, scf472, whole genome shotgun sequence (20128 bp)
Overview 1 RT 1: 7911-13498 bp Neighborhood of RT #1 [7911, 13545] PrgI RVT-GII Intron_maturas2 SpaA RrgB_K2N_iso_D2 SpaA PhdYeFM_antitox Feature: gene Location: 7911-8357 bp Feature: domain Description: PrgI Location: 7923-8193 bp Feature: domain Description: PrgI Location: 792 3-8193 bp Feature: gene Location: 8440-8640 bp Feature: gene Location: 8727-10610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-9828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8991-982 8 bp Feature: domain Description: Intron_maturas2 Location: 9903-10191 bp Feature: domain Description: Intron_maturas2 Location: 9903-10191 bp Feature: gene Location: 11233-13098 bp Feature: domain Description: SpaA Location: 11473-11908 bp Feature: domain Description: SpaA Location: 11473-11908 bp Feature: domain Description: RrgB_K2N_iso_D2 Location: 12037-12499 bp Feature: domain Description: RrgB_K2 N_iso_D2 Location: 12 037-12 499 bp Feature: domain Description: SpaA Location: 12673-12874 bp Feature: domain Description: SpaA Location: 12 673-12 874 bp Feature: gene Location: 13291-13545 bp Feature: domain Description: PhdYeFM_antitox Location: 13294-13498 bp Feature: domain Description: PhdYeFM_antitox Location: 132 94-13498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpaA (pfam17802), RrgB_K2N_iso_D2 (TIGR04226), PhdYeFM_antitox (pfam02604), PrgI (pfam12666), RVT-GII, Intron_maturas2 (pfam01348)