myRT

myRT report for GCA_000436195.1_MGS260

Download annotations/find similar RTs

Seq: FR884947.1 Azospirillum sp. CAG:260 genomic scaffold, scf233, whole genome shotgun sequence (60362 bp)
Overview 1 RT 1: 53364-57027 bp Neighborhood of RT #1 [53364, 57027] DUF1566 RVT-DGRs Feature: gene Location: 53364-53489 bp Feature: gene Location: 54260-54514 bp Ori: CDB39708.1 Feature: domain Description: DUF1566 Location: 54335-54455 bp Feature: domain Description: DUF1 566 Location: 54335-54455 bp Feature: gene Location: 54495-55793 bp Ori: CDB39709.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54717-55416 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5471 7-5541 6 bp Feature: gene Location: 55790-56056 bp Feature: gene Location: 56284-57027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs

Seq: FR884915.1 Azospirillum sp. CAG:260 genomic scaffold, scf93, whole genome shotgun sequence (35097 bp)
Overview 1 RT 1: 3103-8819 bp Neighborhood of RT #1 [3103, 8821] INT_C_like_1 RVT-G2L4 GIIM Phage_integrase DUF1737 Feature: gene Location: 3103-4923 bp Ori: CDB40545.1 Feature: domain Description: INT_C_like_1 Location: 4243-4780 bp Feature: domain Description: INT_C_like_1 Location: 42 43-4780 bp Feature: gene Location: 4939-5724 bp Feature: gene Location: 5773-7077 bp Ori: CDB40547.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 6016-6616 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 6016-6616 bp Feature: domain Description: GIIM Note: maturase Location: 6739-6943 bp Feature: domain Description: GIIM Note: maturase Location: 6739-6943 bp Feature: gene Location: 8016-8597 bp Ori: CDB40548.1 Feature: domain Description: Phage_integrase Location: 8040-8556 bp Feature: domain Description: Phage_integrase Location: 8040-8556 bp Feature: gene Location: 8666-8821 bp Ori: CDB40549.1 Feature: domain Description: DUF1737 Location: 8672-8819 bp Feature: domain Description: DUF1737 Location: 8672 -8819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-G2L4, GIIM (pfam08388), Phage_integrase (pfam00589), DUF1737 (pfam08410)